chr_lengths: Calculate chromosome lengths
In qtl2: Quantitative Trait Locus Mapping in Experimental Crosses
chr_lengths R Documentation
Calculate chromosome lengths
Description
Calculate chromosome lengths for a map object
Usage
chr_lengths(map, collapse_to_AX = FALSE)
Arguments
map
A list of vectors, each specifying locations of the markers.
collapse_to_AX
If TRUE, collapse to the total lengths of the
autosomes and X chromosome.
Details
We take diff(range(v)) for each vector, v.
Value
A vector of chromosome lengths. If
collapse_to_AX=TRUE, the result is a vector of length 2
(autosomal and X chromosome lengths).
See Also
scan1perm()
qtl2 documentation built on April 22, 2023, 1:10 a.m.
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| chr_lengths | R Documentation |
Calculate chromosome lengths
Description
Calculate chromosome lengths for a map object
Usage
chr_lengths(map, collapse_to_AX = FALSE)
Arguments
map |
A list of vectors, each specifying locations of the markers. |
collapse_to_AX |
If TRUE, collapse to the total lengths of the autosomes and X chromosome. |
Details
We take diff(range(v)) for each vector, v.
Value
A vector of chromosome lengths. If
collapse_to_AX=TRUE, the result is a vector of length 2
(autosomal and X chromosome lengths).
See Also
scan1perm()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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