rCNV: Detect Copy Number Variants from SNPs Data

Functions in this package will import filtered variant call format (VCF) files of SNPs data and generate data sets to detect copy number variants, visualize them and do downstream analyses with copy number variants(e.g. Environmental association analyses).

Getting started

Package details

AuthorPiyal Karunarathne [aut, cre] (<https://orcid.org/0000-0002-1934-145X>), Qiujie Zhou [aut] (<https://orcid.org/0000-0001-7351-2371>), Klaus Schliep [aut] (<https://orcid.org/0000-0003-2941-0161>), Pascal Milesi [aut] (<https://orcid.org/0000-0001-8580-4291>)
MaintainerPiyal Karunarathne <piyalkarumail@yahoo.com>
LicenseAGPL (>= 3)
Version1.3.0
URL https://piyalkarum.github.io/rCNV/ https://cran.r-project.org/package=rCNV
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("rCNV")

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rCNV documentation built on Sept. 30, 2024, 9:39 a.m.