dup.plot: Plot classified SNPs into deviants/CNVs and...
In rCNV: Detect Copy Number Variants from SNPs Data
dup.plot R Documentation
Plot classified SNPs into deviants/CNVs and non-deviants/non-CNVs
Description
The function plots detected deviants/CNVs from functions sig.snps,
cnv and dupGet on a median ratio (MedRatio) Vs. proportion of
heterozygote (PropHet) plot.
Usage
dup.plot(ds, ...)
Arguments
ds
a data frame of detected deviants/cnvs (outputs of functions above)
...
other graphical parameters to be passed to the function
plot
Value
Returns no value, only plots proportion of heterozygotes vs allele
median ratio separated by duplication status
Author(s)
Piyal Karunarathne
Examples
## Not run: data(alleleINF)
DD<-dupGet(alleleINF,plot=FALSE)
dup.plot(DD)
## End(Not run)
rCNV documentation built on Sept. 30, 2024, 9:39 a.m.
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| dup.plot | R Documentation |
Plot classified SNPs into deviants/CNVs and non-deviants/non-CNVs
Description
The function plots detected deviants/CNVs from functions sig.snps,
cnv and dupGet on a median ratio (MedRatio) Vs. proportion of
heterozygote (PropHet) plot.
Usage
dup.plot(ds, ...)
Arguments
ds |
a data frame of detected deviants/cnvs (outputs of functions above) |
... |
other graphical parameters to be passed to the function
|
Value
Returns no value, only plots proportion of heterozygotes vs allele median ratio separated by duplication status
Author(s)
Piyal Karunarathne
Examples
## Not run: data(alleleINF)
DD<-dupGet(alleleINF,plot=FALSE)
dup.plot(DD)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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