Man pages for rNeighborQTL
Interval Mapping for Quantitative Trait Loci Underlying Neighbor Effects
| calc_neiprob | Calculating a set of neighbor QTL effects from conditional... |
| calc_pve | Calculating phenotypic variation explained by neighbor... |
| decompose_genoprobs | Decomposition of conditional genotype probabilities |
| eff_neighbor | Estimation of self and neighbor QTL effects across a genome |
| genoprobs2selfprobs | Calculating a set of self QTL effects from conditional... |
| get_markers | Reshaping marker information |
| int_neighbor | Testing marker-by-marker epistasis in neighbor QTL effects |
| logLik_glm.fit | Calculating log-likelihood in generalized linear models |
| min_dist | Calculating the minimum distance |
| neiprob | Calculating neighbor QTL effects |
| perm_neighbor | Permutation tests for neighbor effects with a QTL model |
| plot_eff | Plot self and neighbor QTL effects across a genome |
| plot_nei | Plot LOD score for self or neighbor QTL effects |
| rNeighborQTL-package | rNeighbor QTL: quantitative trait loci mapping for neighbor... |
| scan_neighbor | Genome scan for neighbor effects with a QTL model |
| selfprob | Calculating self QTL effects |
| sim_nei_qtl | Phenotype simulation for neighbor QTL effects |
