write_subScript: This function is used to programatically take vectors of...
In rSHAPE: Simulated Haploid Asexual Population Evolution

This function is used to programatically take vectors of paramters and write suites of R parameter scripts that will form part of a SHAPE experiment that is being built for running. This is a wrapper for writting out the suite of necessary scripts to form a run.

write_subScript(func_subScipt, func_outDir, func_inCombos, func_inParms,
  func_maxJobs, func_appLocation, func_commonArgs, func_submitArgs,
  func_remoteLocation, func_passedArgs,
  func_externalStopper = getOption("shape_external_stopFile"),
  func_sepString = getOption("shape_sepString"))

`func_subScipt`	This is the template script that needs to be replicated
`func_outDir`	This is the filepath directory where output should be placed
`func_inCombos`	This is the combinations of parameters that are to be used in the experiment.
`func_inParms`	# These are additional parameters to be implemented in writing out combinations.
`func_maxJobs`	This is the maximum number of individual R jobs that should be called at once by the shell submission scripts, it can affect both local and remote server calls.
`func_appLocation`	This is the filepath for R so that batch mode runs can be called.
`func_commonArgs`	These are common arguments important when running the batch mode
`func_submitArgs`	These are common arguments important when submitting the batch mode
`func_remoteLocation`	This is a remote server location where an experiment built is to be run it affects the filepathing called by submission scripts and the associated batch mode runs performed.
`func_passedArgs`	These are arguments passed through this wrapper to inner functions.
`func_externalStopper`	This is a file which exists as a flag for stopping SHAPE from trying to create additional replicates.
`func_sepString`	This is the common string used to collapse information.