isOpen-methods: isOpen(bamReader), isOpen(bamWriter): Checking for opened...
In rbamtools: Read and Write BAM (Binary Alignment) Files
Description
Usage
Arguments
Details
Methods
Description
Checks whether the given bamReader or bamWriter represents an opened
connection to a BAM-file.
Usage
1
isOpen(con,rw="")
Arguments
con
An instance of class bamReader or bamWriter.
rw
This argument is included solely for compatibility with the
function template for connections in package base.
It's not evaluated internally.
Details
The function acutally checks, if the externalptr
(reader or writer) slot has nil-value.
Methods
signature(object = "bamReader")-
Returns TRUE when file connection is open.
signature(object = "bamWriter")-
Returns TRUE when file connection is open.
rbamtools documentation built on Nov. 11, 2019, 5:09 p.m.
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Description Usage Arguments Details Methods
Description
Checks whether the given bamReader or bamWriter represents an opened connection to a BAM-file.
Usage
1 | isOpen(con,rw="")
|
Arguments
con |
An instance of class bamReader or bamWriter. |
rw |
This argument is included solely for compatibility with the function template for connections in package base. It's not evaluated internally. |
Details
The function acutally checks, if the externalptr (reader or writer) slot has nil-value.
Methods
signature(object = "bamReader")-
Returns TRUE when file connection is open.
signature(object = "bamWriter")-
Returns TRUE when file connection is open.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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