readPooledBamGapDf: Position data for alignments gaps from multiple BAM files.
The function takes vectors of BAM-file names (plus accompanying names of BAM-index-files) and returns extracted data as data.frame. The data frame contains coordinates of align gaps plus a gap-quality-score (gqs) which quantifies information amount for detection of splice sites.
Filenames of BAM-files to be opened for data extraction.
Optional: Name of BAM-index files
1 2 3 4
Want to suggest features or report bugs for rdrr.io? Use the GitHub issue tracker.