Relative Simulator

blockSim | Perform relatives simulations using large memory blocks in C |

breedFst | Breed a population with an approximate level of theta(Fst) |

calcFst | Caculate locus-wise and population Fst values |

checkFreqs | Make sure that the frequencies are such |

errorRate | Returns the false positive or false negative rates for a set... |

exclusionPower | Calculate the exclusion power of a multiplex by locus |

famSearch | Search a database for siblings or children |

fbiCaucs | CODIS STR Loci allele frequency data |

fetchBMdata | Retrieve data from Budowle and Moretti (1999) from the web |

IBS | Identity by state |

locusIBS | Identity by state at a locus |

lrMix | Calculate locuswise likelihood ratios for two person... |

lrPC | Likelihood Ratio for Parent-Child / Paternity Index |

lrSib | Likelihood Ratio / Kinship Index for full-siblings |

lrSibDebug | Likelihood Ratio / Kinship Index for full-siblings |

normalizeFreqs | Normalize frequencies to 1 |

print.population | Print summary details of a substructed population |

print.profile | Print a DNA profile |

randomChild | Generate a random child from a given DNA profile and a given... |

randomPCPairs | Generate one or more random parent/child pairs from a given... |

randomProfile | Generate a random DNA profile from a given set of allele... |

randomProfilePairs | Generate one or more random DNA profile pairs from a given... |

randomSample | Generate a random sample of related (or unrelated) pairs of... |

randomSib | Generate a random sibling from a given DNA profile and a... |

randomSibPairs | Generate one or more pairs of random siblings from a given... |

readFreqs | Read in a file of allele frequencies |

readProfiles | Read a set of profiles from a file |

readResults | Read a simulation result set from file |

relSim | Relative Simulator |

sim | Perform the relatives simulation |

simNpersonMixture | Simulate and count unique alleles in N person mixtures |

toNexus | Export a population with substructure to a Nexus file |

USCaucs | CODIS STR Loci allele frequency data |

writeCSV | Saves/writes population frequencies to disk |

writePop | Saves/writes population profiles to disk |

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