calcFst | R Documentation |
F_{ST}
valuesThis procedure uses the method of Weir and Cockerham to estimate
\theta
(F_{ST}
) for a population with substructure
calcFst(Pop, subPopIdx = NULL)
Pop |
An object type 'population' |
subPopIdx |
If this vector is not null, then it must consist of
|
A vector of length n_{loci}+1
with locus-wise
\theta
values and an overall \theta
value for the
population
James M. Curran
Weir, B.S., Genetic Data Analysis II, (1996) p.173–179, Sinauer, Sunderland, MA.
breedFst
data(USCaucs)
p = breedFst(USCaucs)
fst = calcFst(p)
fst
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