writePop: Saves/writes population profiles to disk

In relSim: Relative Simulator

Saves/writes population profiles to disk

Description

Writes a population of profiles to disk using the original allele designations rather than the internal integer representations that are used for the other functions.

Usage

writePop(fileName, pop, addAmelo = FALSE, delim = ",", dupLoci = TRUE)

Arguments

fileName	the name and path where the population profiles are to be saved to.
pop	an object of class population, most likely produced by breedFst
addAmelo	The simulated populations do not have Amelogenin. If TRUE then an Amelogenin marker is added to the population, and all the profiles are set to male XY, although this is coded to 1,2 to keep the allele designations numeric.
delim	The allele delimiter.
dupLoci	If TRUE the locus names are written twice in the header, otherwise just once.

Note

Rare alleles are recoded to 108.1.

Author(s)

James M. Curran

See Also

breedFst

Examples

data(USCaucs)
pop = breedFst(USCaucs)
## Not run: 
  writePop("USCaucs.csv", pop)
  
## End(Not run)

relSim documentation built on Aug. 29, 2023, 9:07 a.m.