is_in_db: Is in db

In restez: Create and Query a Local Copy of 'GenBank' in R

Is in db

Description

Determine whether an id(s) is/are present in a database.

Usage

is_in_db(id, db = "nucleotide")

Arguments

id	character, sequence accession ID(s)
db	character, database name

Value

named vector of booleans

See Also

Other database: count_db_ids(), db_create(), db_delete(), db_download(), demo_db_create(), list_db_ids()

Examples

library(restez)
# set the restez path to a temporary dir
restez_path_set(filepath = tempdir())
# create demo database
demo_db_create(n = 5)
# in the demo, IDs are 'demo_1', 'demo_2' ...
ids <- c('thisisnotanid', 'demo_1', 'demo_2')
(is_in_db(id = ids))


# delete demo after example
db_delete(everything = TRUE)

restez documentation built on Oct. 25, 2023, 5:06 p.m.