NewTimeEst: Estimate New Time Points

Description Usage Arguments Value Examples

View source: R/TC_CAR1.R

Description

This function estimate new time points to fit the glsCAR1 for the voom transformed data. Note that this function is very specific for this dataset, with only 4 time points. If there are more than 4 time points, the method needs to be updated.

Usage

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NewTimeEst(v, Subject, Time, TimeMinOut, ncores)

Arguments

v

output of voom function.

Subject

a vector of subjects or experimental units.

Time

a vector of time points.

TimeMinOut

output from the TimeMin function

ncores

number of cores for embarrassingly parallel procedure. Default value of ncores is 1.

Value

New time points.

Examples

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data(res)
data(covset)
v <- res$ori.res$v
v$E <- v$E[1:2,]
v$weights <- v$weights[1:2,]
Subject <- covset$ear
Time <- covset$time
ncores <- 1
NewTimeOut <- rmRNAseq:::NewTimeEst(v, Subject, Time, ncores)
NewTimeOut

rmRNAseq documentation built on Nov. 8, 2019, 5:06 p.m.