Man pages for rpact
Confirmatory Adaptive Clinical Trial Design and Analysis
| AccrualTime | Accrual Time |
| AnalysisResults | Basic Class for Analysis Results |
| AnalysisResultsConditionalDunnett | Analysis Results Multi-Arm Conditional Dunnett |
| AnalysisResultsEnrichment | Basic Class for Analysis Results Enrichment |
| AnalysisResultsEnrichmentFisher | Analysis Results Enrichment Fisher |
| AnalysisResultsEnrichmentInverseNormal | Analysis Results Enrichment Inverse Normal |
| AnalysisResultsFisher | Analysis Results Fisher |
| AnalysisResultsGroupSequential | Analysis Results Group Sequential |
| AnalysisResultsInverseNormal | Analysis Results Inverse Normal |
| AnalysisResultsMultiArm | Basic Class for Analysis Results Multi-Arm |
| AnalysisResultsMultiArmFisher | Analysis Results Multi-Arm Fisher |
| AnalysisResultsMultiArmInverseNormal | Analysis Results Multi-Arm Inverse Normal |
| AnalysisResultsMultiHypotheses | Basic Class for Analysis Results Multi-Hypotheses |
| as251Normal | Algorithm AS 251: Normal Distribution |
| as251StudentT | Algorithm AS 251: Student T Distribution |
| as.data.frame.AnalysisResults | Coerce AnalysisResults to a Data Frame |
| as.data.frame.ParameterSet | Coerce Parameter Set to a Data Frame |
| as.data.frame.PowerAndAverageSampleNumberResult | Coerce Power And Average Sample Number Result to a Data Frame |
| as.data.frame.StageResults | Coerce Stage Results to a Data Frame |
| as.data.frame.TrialDesign | Coerce TrialDesign to a Data Frame |
| as.data.frame.TrialDesignCharacteristics | Coerce TrialDesignCharacteristics to a Data Frame |
| as.data.frame.TrialDesignPlan | Coerce Trial Design Plan to a Data Frame |
| as.data.frame.TrialDesignSet | Coerce Trial Design Set to a Data Frame |
| as.matrix.FieldSet | Coerce Field Set to a Matrix |
| checkInstallationQualificationStatus | Check Installation Qualification Status |
| ClosedCombinationTestResults | Analysis Results Closed Combination Test |
| ConditionalPowerResults | Conditional Power Results |
| ConditionalPowerResultsEnrichmentMeans | Conditional Power Results Enrichment Means |
| ConditionalPowerResultsEnrichmentRates | Conditional Power Results Enrichment Rates |
| ConditionalPowerResultsMeans | Conditional Power Results Means |
| ConditionalPowerResultsRates | Conditional Power Results Rates |
| ConditionalPowerResultsSurvival | Conditional Power Results Survival |
| dataEnrichmentMeans | Enrichment Dataset of Means |
| dataEnrichmentMeansStratified | Stratified Enrichment Dataset of Means |
| dataEnrichmentRates | Enrichment Dataset of Rates |
| dataEnrichmentRatesStratified | Stratified Enrichment Dataset of Rates |
| dataEnrichmentSurvival | Enrichment Dataset of Survival Data |
| dataEnrichmentSurvivalStratified | Stratified Enrichment Dataset of Survival Data |
| dataMeans | One-Arm Dataset of Means |
| dataMultiArmMeans | Multi-Arm Dataset of Means |
| dataMultiArmRates | Multi-Arm Dataset of Rates |
| dataMultiArmSurvival | Multi-Arm Dataset of Survival Data |
| dataRates | One-Arm Dataset of Rates |
| Dataset | Dataset |
| DatasetMeans | Dataset of Means |
| DatasetRates | Dataset of Rates |
| DatasetSurvival | Dataset of Survival Data |
| dataSurvival | One-Arm Dataset of Survival Data |
| disableStartupMessages | Disable Startup Messages |
| enableStartupMessages | Enable Startup Messages |
| EventProbabilities | Event Probabilities |
| fetch.ParameterSet | Extract a single parameter |
| FieldSet | Field Set |
| getAccrualTime | Get Accrual Time |
| getAnalysisResults | Get Analysis Results |
| getAvailablePlotTypes | Get Available Plot Types |
| getClosedCombinationTestResults | Get Closed Combination Test Results |
| getClosedConditionalDunnettTestResults | Get Closed Conditional Dunnett Test Results |
| getConditionalPower | Get Conditional Power |
| getConditionalRejectionProbabilities | Get Conditional Rejection Probabilities |
| getData | Get Simulation Data |
| getDataset | Get Dataset |
| getDesignCharacteristics | Get Design Characteristics |
| getDesignConditionalDunnett | Get Design Conditional Dunnett Test |
| getDesignFisher | Get Design Fisher |
| getDesignGroupSequential | Get Design Group Sequential |
| getDesignInverseNormal | Get Design Inverse Normal |
| getDesignSet | Get Design Set |
| getEventProbabilities | Get Event Probabilities |
| getFinalConfidenceInterval | Get Final Confidence Interval |
| getFinalPValue | Get Final P Value |
| getGroupSequentialProbabilities | Get Group Sequential Probabilities |
| getLambdaStepFunction | Get Lambda Step Function |
| getLogLevel | Get Log Level |
| getLongFormat | Get Long Format |
| getNumberOfSubjects | Get Number Of Subjects |
| getObjectRCode | Get Object R Code |
| getObservedInformationRates | Get Observed Information Rates |
| getOutputFormat | Get Output Format |
| getParameterCaption | Get Parameter Caption |
| getParameterName | Get Parameter Name |
| getParameterType | Get Parameter Type |
| getPerformanceScore | Get Performance Score |
| getPiecewiseSurvivalTime | Get Piecewise Survival Time |
| getPlotSettings | Get Plot Settings |
| getPowerAndAverageSampleNumber | Get Power And Average Sample Number |
| getPowerCounts | Get Power Counts |
| getPowerMeans | Get Power Means |
| getPowerRates | Get Power Rates |
| getPowerSurvival | Get Power Survival |
| getRawData | Get Simulation Raw Data for Survival |
| getRepeatedConfidenceIntervals | Get Repeated Confidence Intervals |
| getRepeatedPValues | Get Repeated P Values |
| getSampleSizeCounts | Get Sample Size Counts |
| getSampleSizeMeans | Get Sample Size Means |
| getSampleSizeRates | Get Sample Size Rates |
| getSampleSizeSurvival | Get Sample Size Survival |
| getSimulationCounts | Get Simulation Counts |
| getSimulationEnrichmentMeans | Get Simulation Enrichment Means |
| getSimulationEnrichmentRates | Get Simulation Enrichment Rates |
| getSimulationEnrichmentSurvival | Get Simulation Enrichment Survival |
| getSimulationMeans | Get Simulation Means |
| getSimulationMultiArmMeans | Get Simulation Multi-Arm Means |
| getSimulationMultiArmRates | Get Simulation Multi-Arm Rates |
| getSimulationMultiArmSurvival | Get Simulation Multi-Arm Survival |
| getSimulationRates | Get Simulation Rates |
| getSimulationSurvival | Get Simulation Survival |
| getStageResults | Get Stage Results |
| getSystemIdentifier | Get System Identifier |
| getTestActions | Get Test Actions |
| getWideFormat | Get Wide Format |
| InstallationQualificationResult | Installation Qualification Result Object |
| kableParameterSet | Create output in Markdown |
| knit_print.FieldSet | Print Field Set in Markdown Code Chunks |
| knit_print.ParameterSet | Print Parameter Set in Markdown Code Chunks |
| knit_print.SummaryFactory | Print Summary Factory in Markdown Code Chunks |
| length.TrialDesignSet | Length of Trial Design Set |
| MarkdownReporter | Markdown Reporter for Test Results |
| mvnprd | Original Algorithm AS 251: Normal Distribution |
| mvstud | Original Algorithm AS 251: Student T Distribution |
| names.AnalysisResults | Names of a Analysis Results Object |
| names.FieldSet | Names of a Field Set Object |
| names.SimulationResults | Names of a Simulation Results Object |
| names.StageResults | Names of a Stage Results Object |
| names.TrialDesignSet | Names of a Trial Design Set Object |
| NumberOfSubjects | Number Of Subjects |
| param_accrualIntensity | Parameter Description: Accrual Intensity |
| param_accrualIntensity_counts | Parameter Description: accrualIntensity for Counts |
| param_accrualIntensityType | Parameter Description: Accrual Intensity Type |
| param_accrualTime | Parameter Description: Accrual Time |
| param_accrualTime_counts | Parameter Description: accrualTime for Counts |
| param_activeArms | Parameter Description: Active Arms |
| param_adaptations | Parameter Description: Adaptations |
| param_allocationRatioPlanned | Parameter Description: Allocation Ratio Planned |
| param_allocationRatioPlanned_sampleSize | Parameter Description: Allocation Ratio Planned With Optimum... |
| param_alpha | Parameter Description: Alpha |
| param_alternative | Parameter Description: Alternative |
| param_alternative_simulation | Parameter Description: Alternative for Simulation |
| param_beta | Parameter Description: Beta |
| param_bindingFutility | Parameter Description: Binding Futility |
| param_calcEventsFunction | Parameter Description: Calculate Events Function |
| param_calcSubjectsFunction | Parameter Description: Calculate Subjects Function |
| param_conditionalPower | Parameter Description: Conditional Power |
| param_conditionalPowerSimulation | Parameter Description: Conditional Power |
| param_dataInput | Parameter Description: Data Input |
| param_design | Parameter Description: Design |
| param_design_with_default | Parameter Description: Design with Default |
| param_digits | Parameter Description: Digits |
| param_directionUpper | Parameter Description: Direction Upper |
| param_doseLevels | Parameter Description: Dose Levels |
| param_dropoutRate1 | Parameter Description: Dropout Rate (1) |
| param_dropoutRate2 | Parameter Description: Dropout Rate (2) |
| param_dropoutTime | Parameter Description: Dropout Time |
| param_effectList | Parameter Description: Effect List |
| param_effectMatrix | Parameter Description: Effect Matrix |
| param_effectMeasure | Parameter Description: Effect Measure |
| param_epsilonValue | Parameter Description: Epsilon Value |
| ParameterSet | Parameter Set |
| param_eventTime | Parameter Description: Event Time |
| param_fixedExposureTime_counts | Parameter Description: fixedExposureTime for Counts |
| param_followUpTime_counts | Parameter Description: followUpTime for Counts |
| param_gED50 | Parameter Description: G ED50 |
| param_grid | Parameter Description: Grid (Output Specification Of Multiple... |
| param_groups | Parameter Description: Number Of Treatment Groups |
| param_hazardRatio | Parameter Description: Hazard Ratio |
| param_includeAllParameters | Parameter Description: Include All Parameters |
| param_informationEpsilon | Parameter Description: Information Epsilon |
| param_informationRates | Parameter Description: Information Rates |
| param_intersectionTest_Enrichment | Parameter Description: Intersection Test |
| param_intersectionTest_MultiArm | Parameter Description: Intersection Test |
| param_kappa | Parameter Description: Kappa |
| param_kMax | Parameter Description: Maximum Number of Stages |
| param_lambda1 | Parameter Description: Lambda (1) |
| param_lambda1_counts | Parameter Description: lambda (1) for Counts |
| param_lambda2 | Parameter Description: Lambda (2) |
| param_lambda2_counts | Parameter Description: lambda (2) for Counts |
| param_lambda_counts | Parameter Description: lambda for Counts |
| param_legendPosition | Parameter Description: Legend Position On Plots |
| param_maxInformation | Parameter Description: Maximum Information |
| param_maxNumberOfEventsPerStage | Parameter Description: Max Number Of Events Per Stage |
| param_maxNumberOfIterations | Parameter Description: Maximum Number Of Iterations |
| param_maxNumberOfSubjects | Parameter Description: Maximum Number Of Subjects |
| param_maxNumberOfSubjectsPerStage | Parameter Description: Maximum Number Of Subjects Per Stage |
| param_maxNumberOfSubjects_survival | Parameter Description: Maximum Number Of Subjects For... |
| param_median1 | Parameter Description: Median (1) |
| param_median2 | Parameter Description: Median (2) |
| param_minNumberOfEventsPerStage | Parameter Description: Min Number Of Events Per Stage |
| param_minNumberOfSubjectsPerStage | Parameter Description: Minimum Number Of Subjects Per Stage |
| param_niceColumnNamesEnabled | Parameter Description: Nice Column Names Enabled |
| param_nMax | Parameter Description: N_max |
| param_normalApproximation | Parameter Description: Normal Approximation |
| param_nPlanned | Parameter Description: N Planned |
| param_overdispersion_counts | Parameter Description: overdispersion for Counts |
| param_palette | Parameter Description: Palette |
| param_pi1_rates | Parameter Description: Pi (1) for Rates |
| param_pi1_survival | Parameter Description: Pi (1) for Survival Data |
| param_pi2_rates | Parameter Description: Pi (2) for Rates |
| param_pi2_survival | Parameter Description: Pi (2) for Survival Data |
| param_piecewiseSurvivalTime | Parameter Description: Piecewise Survival Time |
| param_plannedCalendarTime | Parameter Description: Planned Calendar Time |
| param_plannedEvents | Parameter Description: Planned Events |
| param_plannedSubjects | Parameter Description: Planned Subjects |
| param_plotPointsEnabled | Parameter Description: Plot Points Enabled |
| param_plotSettings | Parameter Description: Plot Settings |
| param_populations | Parameter Description: Populations |
| param_rValue | Parameter Description: R Value |
| param_seed | Parameter Description: Seed |
| param_selectArmsFunction | Parameter Description: Select Arms Function |
| param_selectPopulationsFunction | Parameter Description: Select Populations Function |
| param_showSource | Parameter Description: Show Source |
| param_showStatistics | Parameter Description: Show Statistics |
| param_sided | Parameter Description: Sided |
| param_slope | Parameter Description: Slope |
| param_stage | Parameter Description: Stage |
| param_stageResults | Parameter Description: Stage Results |
| param_stDev | Parameter Description: Standard Deviation |
| param_stDevH1 | Parameter Description: Standard Deviation Under Alternative |
| param_stDevSimulation | Parameter Description: Standard Deviation for Simulation |
| param_stratifiedAnalysis | Parameter Description: Stratified Analysis |
| param_successCriterion | Parameter Description: Success Criterion |
| param_theta | Parameter Description: Theta |
| param_theta_counts | Parameter Description: theta for Counts |
| param_thetaH0 | Parameter Description: Theta H0 |
| param_thetaH1 | Parameter Description: Effect Under Alternative |
| param_three_dots | Parameter Description: "..." |
| param_three_dots_plot | Parameter Description: "..." (optional plot arguments) |
| param_threshold | Parameter Description: Threshold |
| param_tolerance | Parameter Description: Tolerance |
| param_typeOfComputation | Parameter Description: Type Of Computation |
| param_typeOfDesign | Parameter Description: Type of Design |
| param_typeOfSelection | Parameter Description: Type of Selection |
| param_typeOfShapeMeans | Parameter Description: Type Of Shape |
| param_typeOfShapeRates | Parameter Description: Type Of Shape |
| param_typeOfShapeSurvival | Parameter Description: Type Of Shape |
| param_userAlphaSpending | Parameter Description: User Alpha Spending |
| param_varianceOption | Parameter Description: Variance Option |
| PerformanceScore | Performance Score |
| PiecewiseSurvivalTime | Piecewise Exponential Survival Time |
| plot.AnalysisResults | Analysis Results Plotting |
| plot.Dataset | Dataset Plotting |
| plot.EventProbabilities | Event Probabilities Plotting |
| plot.NumberOfSubjects | Number Of Subjects Plotting |
| plot.ParameterSet | Parameter Set Plotting |
| PlotSettings | Plot Settings |
| plot.SimulationResults | Simulation Results Plotting |
| plot.StageResults | Stage Results Plotting |
| plot.SummaryFactory | Summary Factory Plotting |
| plot.TrialDesign | Trial Design Plotting |
| plot.TrialDesignPlan | Trial Design Plan Plotting |
| plot.TrialDesignSet | Trial Design Set Plotting |
| plot.TrialDesignSummaries | Plot Trial Design Summaries |
| PowerAndAverageSampleNumberResult | Power and Average Sample Number Result |
| printCitation | Print Citation |
| print.Dataset | Print Dataset Values |
| print.FieldSet | Print Field Set Values |
| print.InstallationQualificationResult | Print Installation Qualification Result |
| print.ParameterSet | Print Parameter Set Values |
| print.SummaryFactory | Summary Factory Printing |
| print.TrialDesignCharacteristics | Trial Design Characteristics Printing |
| print.TrialDesignSummaries | Print Trial Design Summaries |
| rawDataTwoArmNormal | Raw Dataset Of A Two Arm Continuous Outcome With Covariates |
| readDataset | Read Dataset |
| readDatasets | Read Multiple Datasets |
| resetLogLevel | Reset Log Level |
| resetOptions | Reset Options |
| rpact | rpact - Confirmatory Adaptive Clinical Trial Design and... |
| saveOptions | Save Options |
| setLogLevel | Set Log Level |
| setOutputFormat | Set Output Format |
| setupPackageTests | Setup Package Tests |
| SimulationResults | Class for Simulation Results |
| SimulationResultsCountData | Class for Simulation Results Count Data |
| SimulationResultsEnrichmentMeans | Class for Simulation Results Enrichment Means |
| SimulationResultsEnrichmentRates | Class for Simulation Results Enrichment Rates |
| SimulationResultsEnrichmentSurvival | Class for Simulation Results Enrichment Survival |
| SimulationResultsMeans | Class for Simulation Results Means |
| SimulationResultsMultiArmMeans | Class for Simulation Results Multi-Arm Means |
| SimulationResultsMultiArmRates | Class for Simulation Results Multi-Arm Rates |
| SimulationResultsMultiArmSurvival | Class for Simulation Results Multi-Arm Survival |
| SimulationResultsRates | Class for Simulation Results Rates |
| SimulationResultsSurvival | Class for Simulation Results Survival |
| StageResults | Basic Stage Results |
| StageResultsEnrichmentMeans | Stage Results Enrichment Means |
| StageResultsEnrichmentRates | Stage Results Enrichment Rates |
| StageResultsEnrichmentSurvival | Stage Results Enrichment Survival |
| StageResultsMeans | Stage Results of Means |
| StageResultsMultiArmMeans | Stage Results Multi Arm Means |
| StageResultsMultiArmRates | Stage Results Multi Arm Rates |
| StageResultsMultiArmSurvival | Stage Results Multi Arm Survival |
| StageResultsRates | Stage Results of Rates |
| StageResultsSurvival | Stage Results of Survival Data |
| summary.AnalysisResults | Analysis Results Summary |
| summary.Dataset | Dataset Summary |
| SummaryFactory | Summary Factory |
| summary.ParameterSet | Parameter Set Summary |
| summary.TrialDesignSet | Trial Design Set Summary |
| testPackage | Test and Validate the rpact Package Installation |
| test_plan_section | Test Plan Section |
| TrialDesign | Basic Trial Design |
| TrialDesignCharacteristics | Trial Design Characteristics |
| TrialDesignConditionalDunnett | Conditional Dunnett Design |
| TrialDesignFisher | Fisher Design |
| TrialDesignGroupSequential | Group Sequential Design |
| TrialDesignInverseNormal | Inverse Normal Design |
| TrialDesignPlan | Basic Trial Design Plan |
| TrialDesignPlanCountData | Trial Design Plan Count Data |
| TrialDesignPlanMeans | Trial Design Plan Means |
| TrialDesignPlanRates | Trial Design Plan Rates |
| TrialDesignPlanSurvival | Trial Design Plan Survival |
| TrialDesignSet | Class for trial design sets. |
| utilitiesForPiecewiseExponentialDistribution | The Piecewise Exponential Distribution |
| utilitiesForSurvivalTrials | Survival Helper Functions for Conversion of Pi, Lambda,... |
| writeDataset | Write Dataset |
| writeDatasets | Write Multiple Datasets |
