Man pages for rpact
Confirmatory Adaptive Clinical Trial Design and Analysis

AccrualTimeAccrual Time
AnalysisResultsBasic Class for Analysis Results
AnalysisResultsConditionalDunnettAnalysis Results Multi-Arm Conditional Dunnett
AnalysisResultsEnrichmentBasic Class for Analysis Results Enrichment
AnalysisResultsEnrichmentFisherAnalysis Results Enrichment Fisher
AnalysisResultsEnrichmentInverseNormalAnalysis Results Enrichment Inverse Normal
AnalysisResultsFisherAnalysis Results Fisher
AnalysisResultsGroupSequentialAnalysis Results Group Sequential
AnalysisResultsInverseNormalAnalysis Results Inverse Normal
AnalysisResultsMultiArmBasic Class for Analysis Results Multi-Arm
AnalysisResultsMultiArmFisher-classAnalysis Results Multi-Arm Fisher
AnalysisResultsMultiArmInverseNormalAnalysis Results Multi-Arm Inverse Normal
AnalysisResultsMultiHypothesesBasic Class for Analysis Results Multi-Hypotheses
as.data.frame.AnalysisResultsCoerce AnalysisResults to a Data Frame
as.data.frame.ParameterSetCoerce Parameter Set to a Data Frame
as.data.frame.PowerAndAverageSampleNumberResultCoerce Power And Average Sample Number Result to a Data Frame
as.data.frame.StageResultsCoerce Stage Results to a Data Frame
as.data.frame.TrialDesignCoerce TrialDesign to a Data Frame
as.data.frame.TrialDesignCharacteristicsCoerce TrialDesignCharacteristics to a Data Frame
as.data.frame.TrialDesignPlanCoerce Trial Design Plan to a Data Frame
as.data.frame.TrialDesignSetCoerce Trial Design Set to a Data Frame
as.matrix.FieldSetCoerce Field Set to a Matrix
ClosedCombinationTestResultsAnalysis Results Closed Combination Test
ConditionalPowerResultsConditional Power Results
ConditionalPowerResultsEnrichmentMeansConditional Power Results Enrichment Means
ConditionalPowerResultsEnrichmentRatesConditional Power Results Enrichment Rates
ConditionalPowerResultsMeansConditional Power Results Means
ConditionalPowerResultsRatesConditional Power Results Rates
ConditionalPowerResultsSurvivalConditional Power Results Survival
dataEnrichmentMeansEnrichment Dataset of Means
dataEnrichmentMeansStratifiedStratified Enrichment Dataset of Means
dataEnrichmentRatesEnrichment Dataset of Rates
dataEnrichmentRatesStratifiedStratified Enrichment Dataset of Rates
dataEnrichmentSurvivalEnrichment Dataset of Survival Data
dataEnrichmentSurvivalStratifiedStratified Enrichment Dataset of Survival Data
dataMeansOne-Arm Dataset of Means
dataMultiArmMeansMulti-Arm Dataset of Means
dataMultiArmRatesMulti-Arm Dataset of Rates
dataMultiArmSurvivalMulti-Arm Dataset of Survival Data
dataRatesOne-Arm Dataset of Rates
DatasetDataset
DatasetMeansDataset of Means
DatasetRatesDataset of Rates
DatasetSurvivalDataset of Survival Data
dataSurvivalOne-Arm Dataset of Survival Data
EventProbabilitiesEvent Probabilities
FieldSetField Set
getAccrualTimeGet Accrual Time
getAnalysisResultsGet Analysis Results
getAvailablePlotTypesGet Available Plot Types
getClosedCombinationTestResultsGet Closed Combination Test Results
getClosedConditionalDunnettTestResultsGet Closed Conditional Dunnett Test Results
getConditionalPowerGet Conditional Power
getConditionalRejectionProbabilitiesGet Conditional Rejection Probabilities
getDataGet Simulation Data
getDatasetGet Dataset
getDesignCharacteristicsGet Design Characteristics
getDesignConditionalDunnettGet Design Conditional Dunnett Test
getDesignFisherGet Design Fisher
getDesignGroupSequentialGet Design Group Sequential
getDesignInverseNormalGet Design Inverse Normal
getDesignSetGet Design Set
getEventProbabilitiesGet Event Probabilities
getFinalConfidenceIntervalGet Final Confidence Interval
getFinalPValueGet Final P Value
getGroupSequentialProbabilitiesGet Group Sequential Probabilities
getLambdaStepFunctionGet Lambda Step Function
getLogLevelGet Log Level
getLongFormatGet Long Format
getNumberOfSubjectsGet Number Of Subjects
getObjectRCodeGet Object R Code
getObservedInformationRatesGet Observed Information Rates
getOutputFormatGet Output Format
getParameterCaptionGet Parameter Caption
getParameterNameGet Parameter Name
getPerformanceScoreGet Performance Score
getPiecewiseSurvivalTimeGet Piecewise Survival Time
getPlotSettingsGet Plot Settings
getPowerAndAverageSampleNumberGet Power And Average Sample Number
getPowerMeansGet Power Means
getPowerRatesGet Power Rates
getPowerSurvivalGet Power Survival
getRawDataGet Simulation Raw Data for Survival
getRepeatedConfidenceIntervalsGet Repeated Confidence Intervals
getRepeatedPValuesGet Repeated P Values
getSampleSizeMeansGet Sample Size Means
getSampleSizeRatesGet Sample Size Rates
getSampleSizeSurvivalGet Sample Size Survival
getSimulationEnrichmentMeansGet Simulation Enrichment Means
getSimulationEnrichmentRatesGet Simulation Enrichment Rates
getSimulationEnrichmentSurvivalGet Simulation Enrichment Survival
getSimulationMeansGet Simulation Means
getSimulationMultiArmMeansGet Simulation Multi-Arm Means
getSimulationMultiArmRatesGet Simulation Multi-Arm Rates
getSimulationMultiArmSurvivalGet Simulation Multi-Arm Survival
getSimulationRatesGet Simulation Rates
getSimulationSurvivalGet Simulation Survival
getStageResultsGet Stage Results
getTestActionsGet Test Actions
getWideFormatGet Wide Format
kableCreate tables in Markdown
kable.ParameterSetCreate output in Markdown
knit_print.ParameterSetPrint Parameter Set in Markdown Code Chunks
length.TrialDesignSetLength of Trial Design Set
names.AnalysisResultsNames of a Analysis Results Object
names.FieldSetNames of a Field Set Object
names.SimulationResultsNames of a Simulation Results Object
names.StageResultsNames of a Stage Results Object
names.TrialDesignSetNames of a Trial Design Set Object
NumberOfSubjectsNumber Of Subjects
param_accrualIntensityParameter Description: Accrual Intensity
param_accrualIntensityTypeParameter Description: Accrual Intensity Type
param_accrualTimeParameter Description: Accrual Time
param_activeArmsParameter Description: Active Arms
param_adaptationsParameter Description: Adaptations
param_allocationRatioPlannedParameter Description: Allocation Ratio Planned
param_allocationRatioPlanned_sampleSizeParameter Description: Allocation Ratio Planned With Optimum...
param_alphaParameter Description: Alpha
param_alternativeParameter Description: Alternative
param_alternative_simulationParameter Description: Alternative for Simulation
param_betaParameter Description: Beta
param_bindingFutilityParameter Description: Binding Futility
param_calcEventsFunctionParameter Description: Calculate Events Function
param_calcSubjectsFunctionParameter Description: Calculate Subjects Function
param_conditionalPowerParameter Description: Conditional Power
param_conditionalPowerSimulationParameter Description: Conditional Power
param_dataInputParameter Description: Data Input
param_designParameter Description: Design
param_design_with_defaultParameter Description: Design with Default
param_digitsParameter Description: Digits
param_directionUpperParameter Description: Direction Upper
param_dropoutRate1Parameter Description: Dropout Rate (1)
param_dropoutRate2Parameter Description: Dropout Rate (2)
param_dropoutTimeParameter Description: Dropout Time
param_effectListParameter Description: Effect List
param_effectMatrixParameter Description: Effect Matrix
param_effectMeasureParameter Description: Effect Measure
param_epsilonValueParameter Description: Epsilon Value
ParameterSetParameter Set
param_eventTimeParameter Description: Event Time
param_gED50Parameter Description: G ED50
param_gridParameter Description: Grid (Output Specification Of Multiple...
param_groupsParameter Description: Number Of Treatment Groups
param_hazardRatioParameter Description: Hazard Ratio
param_includeAllParametersParameter Description: Include All Parameters
param_informationEpsilonParameter Description: Information Epsilon
param_informationRatesParameter Description: Information Rates
param_intersectionTest_EnrichmentParameter Description: Intersection Test
param_intersectionTest_MultiArmParameter Description: Intersection Test
param_kappaParameter Description: Kappa
param_kMaxParameter Description: Maximum Number of Stages
param_lambda1Parameter Description: Lambda (1)
param_lambda2Parameter Description: Lambda (2)
param_legendPositionParameter Description: Legend Position On Plots
param_maxInformationParameter Description: Maximum Information
param_maxNumberOfEventsPerStageParameter Description: Max Number Of Events Per Stage
param_maxNumberOfIterationsParameter Description: Maximum Number Of Iterations
param_maxNumberOfSubjectsParameter Description: Maximum Number Of Subjects
param_maxNumberOfSubjectsPerStageParameter Description: Maximum Number Of Subjects Per Stage
param_maxNumberOfSubjects_survivalParameter Description: Maximum Number Of Subjects For...
param_median1Parameter Description: Median (1)
param_median2Parameter Description: Median (2)
param_minNumberOfEventsPerStageParameter Description: Min Number Of Events Per Stage
param_minNumberOfSubjectsPerStageParameter Description: Minimum Number Of Subjects Per Stage
param_niceColumnNamesEnabledParameter Description: Nice Column Names Enabled
param_nMaxParameter Description: N_max
param_normalApproximationParameter Description: Normal Approximation
param_nPlannedParameter Description: N Planned
param_paletteParameter Description: Palette
param_pi1_ratesParameter Description: Pi (1) for Rates
param_pi1_survivalParameter Description: Pi (1) for Survival Data
param_pi2_ratesParameter Description: Pi (2) for Rates
param_pi2_survivalParameter Description: Pi (2) for Survival Data
param_piecewiseSurvivalTimeParameter Description: Piecewise Survival Time
param_plannedEventsParameter Description: Planned Events
param_plannedSubjectsParameter Description: Planned Subjects
param_plotPointsEnabledParameter Description: Plot Points Enabled
param_plotSettingsParameter Description: Plot Settings
param_populationsParameter Description: Populations
param_rValueParameter Description: R Value
param_seedParameter Description: Seed
param_selectArmsFunctionParameter Description: Select Arms Function
param_selectPopulationsFunctionParameter Description: Select Populations Function
param_showSourceParameter Description: Show Source
param_showStatisticsParameter Description: Show Statistics
param_sidedParameter Description: Sided
param_slopeParameter Description: Slope
param_stageParameter Description: Stage
param_stageResultsParameter Description: Stage Results
param_stDevParameter Description: Standard Deviation
param_stDevH1Parameter Description: Standard Deviation Under Alternative
param_stDevSimulationParameter Description: Standard Deviation for Simulation
param_stratifiedAnalysisParameter Description: Stratified Analysis
param_successCriterionParameter Description: Success Criterion
param_thetaParameter Description: Theta
param_thetaH0Parameter Description: Theta H0
param_thetaH1Parameter Description: Effect Under Alternative
param_three_dotsParameter Description: "..."
param_three_dots_plotParameter Description: "..." (optional plot arguments)
param_thresholdParameter Description: Threshold
param_toleranceParameter Description: Tolerance
param_typeOfComputationParameter Description: Type Of Computation
param_typeOfDesignParameter Description: Type of Design
param_typeOfSelectionParameter Description: Type of Selection
param_typeOfShapeParameter Description: Type Of Shape
param_userAlphaSpendingParameter Description: User Alpha Spending
param_varianceOptionParameter Description: Variance Option
PerformanceScorePerformance Score
PiecewiseSurvivalTimePiecewise Exponential Survival Time
plot.AnalysisResultsAnalysis Results Plotting
plot.DatasetDataset Plotting
plot.EventProbabilitiesEvent Probabilities Plotting
plot.NumberOfSubjectsNumber Of Subjects Plotting
plot.ParameterSetParameter Set Plotting
PlotSettingsPlot Settings
plot.SimulationResultsSimulation Results Plotting
plot.StageResultsStage Results Plotting
plot.SummaryFactorySummary Factory Plotting
plot.TrialDesignTrial Design Plotting
plot.TrialDesignPlanTrial Design Plan Plotting
plot.TrialDesignSetTrial Design Set Plotting
PowerAndAverageSampleNumberResultPower and Average Sample Number Result
printCitationPrint Citation
print.DatasetPrint Dataset Values
print.FieldSetPrint Field Set Values
print.ParameterSetPrint Parameter Set Values
print.SimulationResultsPrint Simulation Results
print.SummaryFactorySummary Factory Printing
print.TrialDesignCharacteristicsTrial Design Characteristics Printing
rawDataTwoArmNormalRaw Dataset Of A Two Arm Continuous Outcome With Covariates
readDatasetRead Dataset
readDatasetsRead Multiple Datasets
resetLogLevelReset Log Level
rpactrpact - Confirmatory Adaptive Clinical Trial Design and...
setLogLevelSet Log Level
setOutputFormatSet Output Format
SimulationResultsClass for Simulation Results
SimulationResultsEnrichmentMeansClass for Simulation Results Enrichment Means
SimulationResultsEnrichmentRatesClass for Simulation Results Enrichment Rates
SimulationResultsEnrichmentSurvivalClass for Simulation Results Enrichment Survival
SimulationResultsMeansClass for Simulation Results Means
SimulationResultsMultiArmMeansClass for Simulation Results Multi-Arm Means
SimulationResultsMultiArmRatesClass for Simulation Results Multi-Arm Rates
SimulationResultsMultiArmSurvivalClass for Simulation Results Multi-Arm Survival
SimulationResultsRatesClass for Simulation Results Rates
SimulationResultsSurvivalClass for Simulation Results Survival
StageResultsBasic Stage Results
StageResultsEnrichmentMeansStage Results Enrichment Means
StageResultsEnrichmentRatesStage Results Enrichment Rates
StageResultsEnrichmentSurvivalStage Results Enrichment Survival
StageResultsMeansStage Results of Means
StageResultsMultiArmMeansStage Results Multi Arm Means
StageResultsMultiArmRatesStage Results Multi Arm Rates
StageResultsMultiArmSurvivalStage Results Multi Arm Survival
StageResultsRatesStage Results of Rates
StageResultsSurvivalStage Results of Survival Data
sub-TrialDesignSet-methodAccess Trial Design by Index
summary.AnalysisResultsAnalysis Results Summary
summary.DatasetDataset Summary
SummaryFactorySummary Factory
summary.ParameterSetParameter Set Summary
summary.TrialDesignSetTrial Design Set Summary
testPackageTest Package
test_plan_sectionTest Plan Section
t-FieldSet-methodField Set Transpose
TrialDesignBasic Trial Design
TrialDesignCharacteristicsTrial Design Characteristics
TrialDesignConditionalDunnettConditional Dunnett Design
TrialDesignFisherFisher Design
TrialDesignGroupSequentialGroup Sequential Design
TrialDesignInverseNormalInverse Normal Design
TrialDesignPlanBasic Trial Design Plan
TrialDesignPlanMeansTrial Design Plan Means
TrialDesignPlanRatesTrial Design Plan Rates
TrialDesignPlanSurvivalTrial Design Plan Survival
TrialDesignSetClass for trial design sets.
utilitiesForPiecewiseExponentialDistributionThe Piecewise Exponential Distribution
utilitiesForSurvivalTrialsSurvival Helper Functions for Conversion of Pi, Lambda,...
writeDatasetWrite Dataset
writeDatasetsWrite Multiple Datasets
rpact documentation built on July 9, 2023, 6:30 p.m.