filter_list: Process the cell markers that overlap between the cell...
In sccca: Single-Cell Correlation Based Cell Type Annotation
filter_list R Documentation
Process the cell markers that overlap between the cell markers and scRNA matrix
Description
This Function is used to return the cell markers that overlap between the cell markers and scRNA matrix
Usage
filter_list(gene_list, passed_cells)
Arguments
gene_list
list of unique genes of cell types.
passed_cells
cells types that pass the specified threshold.
Value
list of cell types which genes are found in the input matrix.
Author(s)
Mohmed Soudy Mohamed.soudy@uni.lu and Sohpie LE BARS sophie.lebars@uni.lu and Enrico Glaab enrico.glaab@uni.lu
sccca documentation built on May 29, 2024, 2:22 a.m.
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| filter_list | R Documentation |
Process the cell markers that overlap between the cell markers and scRNA matrix
Description
This Function is used to return the cell markers that overlap between the cell markers and scRNA matrix
Usage
filter_list(gene_list, passed_cells)
Arguments
gene_list |
list of unique genes of cell types. |
passed_cells |
cells types that pass the specified threshold. |
Value
list of cell types which genes are found in the input matrix.
Author(s)
Mohmed Soudy Mohamed.soudy@uni.lu and Sohpie LE BARS sophie.lebars@uni.lu and Enrico Glaab enrico.glaab@uni.lu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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