API for scfetch
Access and Format Single-Cell RNA-Seq Datasets from Public Resources
| Global functions | |
|---|---|
| .onLoad | Source code |
| Bam2Fastq | Man page Source code |
| Check10XFiles | Source code |
| CheckBam | Source code |
| CheckColumns | Source code |
| CheckFilter | Source code |
| CheckParas | Source code |
| DownloadBam | Man page Source code |
| DownloadSRA | Man page Source code |
| ExportSeurat | Man page Source code |
| ExtractCBComposition | Man page Source code |
| ExtractCBDatasets | Man page Source code |
| ExtractCELLxGENEMeta | Man page Source code |
| ExtractDesc | Source code |
| ExtractField | Source code |
| ExtractGEOExp | Man page Source code |
| ExtractGEOExpSupp | Man page Source code |
| ExtractGEOExpSupp10x | Man page Source code |
| ExtractGEOExpSuppAll | Man page Source code |
| ExtractGEOInfo | Man page Source code |
| ExtractGEOMeta | Man page Source code |
| ExtractGEOSubMeta | Man page Source code |
| ExtractHCAMeta | Man page Source code |
| ExtractHCAProjects | Source code |
| ExtractPanglaoDBComposition | Man page Source code |
| ExtractPanglaoDBMeta | Man page Source code |
| ExtractRun | Man page Source code |
| ExtractSample | Source code |
| ExtractSampleOnline | Source code |
| ExtractZenodoMeta | Man page Source code |
| ExtractZenodoMetaSingle | Source code |
| GEOobj | Source code |
| GetFastqLen | Source code |
| HCAAttrFilter | Source code |
| HCAExtactData | Source code |
| HCAPasteCol | Source code |
| HCAPasteColdf | Source code |
| IdentifyReads | Source code |
| ImportSeurat | Man page Source code |
| InheritParient | Source code |
| Load2Seurat | Source code |
| PanglaoDBComposition | Man page |
| PanglaoDBMeta | Man page |
| ParseCBDatasets | Man page Source code |
| ParseCELLxGENE | Man page Source code |
| ParseGEO | Man page Source code |
| ParseHCA | Man page Source code |
| ParsePanglaoDB | Man page Source code |
| ParseZenodo | Man page Source code |
| PasteAttr | Source code |
| PasteAttrCXG | Source code |
| PostDatasetURL | Source code |
| PrepareCELLxGENEUrls | Source code |
| Read10XOnline | Source code |
| RecurURLRetrieval | Source code |
| RunPrefetch | Source code |
| RunSamdump | Source code |
| RunSplit | Source code |
| Runbamtofastq | Source code |
| SCEAnnData | Man page Source code |
| SCELoom | Man page Source code |
| ShowCBDatasets | Man page Source code |
| ShowCELLxGENEDatasets | Man page Source code |
| ShowHCAProjects | Man page Source code |
| SimpleCol | Source code |
| SplitSRA | Man page Source code |
| StatDBAttribute | Man page Source code |
| URLRetrieval | Source code |
| cellxgeneAttrFilter | Source code |
| getSamples_internal | Source code |
| loom2sce_internal | Source code |
| mergeExperiments | Source code |
| sce2loom_internal | Source code |
