ExtractGEOExpSupp10x: Fortmat Supplementary Files to 10x.

In scfetch: Access and Format Single-Cell RNA-Seq Datasets from Public Resources

Fortmat Supplementary Files to 10x.

Description

Fortmat Supplementary Files to 10x.

Usage

ExtractGEOExpSupp10x(
  acce,
  supp.idx = 1,
  timeout = 3600,
  out.folder = NULL,
  gene2feature = TRUE
)

Arguments

acce	GEO accession number.
supp.idx	The index of supplementary files to download. Default: 1.
timeout	Timeout for download.file. Default: 3600.
out.folder	Output folder to save 10x files. Default: NULL (current working directory).
gene2feature	Logical value, whether to rename genes.tsv.gz to features.tsv.gz. Default: TURE.

scfetch documentation built on Nov. 22, 2023, 1:09 a.m.