ExtractZenodoMeta: Prepare Dataframe with Zenodo DOIs.
In scfetch: Access and Format Single-Cell RNA-Seq Datasets from Public Resources

ExtractZenodoMeta

R Documentation

Prepare Dataframe with Zenodo DOIs.

Description

Prepare Dataframe with Zenodo DOIs.

Usage

ExtractZenodoMeta(doi, file.ext = c("rdata", "h5ad"))

Arguments

`doi`	A vector of Zenodo DOIs, should start with "10.5281/zenodo.".
`file.ext`	The valid file extension for download. When NULL, use all files. Default: c("rdata", "h5ad").

Value

Dataframe contains files with valid extension in given Zenodo DOI.

Examples


zebrafish.df <- ExtractZenodoMeta(doi = "10.5281/zenodo.7243603")
ExtractZenodoMeta(doi = "10.5281/zenodo.48065") # Restricted Access
# vector of dois
multi.dois <- ExtractZenodoMeta(doi = c(
  "1111", "10.5281/zenodo.7243603",
  "10.5281/zenodo.7244441"
))

scfetch documentation built on Nov. 22, 2023, 1:09 a.m.