check_dv_covid: Check for consistency in COVID-19 DV variables, DVREAS and...

In sdtmchecks: Data Quality Checks for Study Data Tabulation Model (SDTM) Datasets

Check for consistency in COVID-19 DV variables, DVREAS and DVEPRELI

Description

This check looks for inconsistency between DVREAS and DVEPRELI. If DVREAS indicates a COVID-19 related deviation, then DVEPRELI should not be missing and vice versa. This check applies to studies using the Protocol Deviation Management System (PDMS).

Usage

check_dv_covid(DV)

Arguments

DV	Protocol Deviations SDTM dataset with variables USUBJID, DVREAS, DVEPRELI

Value

boolean value if check failed or passed with 'msg' attribute if the test failed

Author(s)

Mij Rahman

See Also

Other COVID: check_ae_aeacn_ds_disctx_covid(), check_ae_aeacnoth_ds_stddisc_covid(), check_dv_ae_aedecod_covid()

Examples

DV <- data.frame(
    USUBJID = 1:3,
    DVEPRELI = c("Y","N","Y"),
    DVREAS=c("EPIDEMIC/PANDEMIC INFECTION","EPIDEMIC/PANDEMIC INFECTION",""),
    stringsAsFactors=FALSE
)

check_dv_covid(DV)

sdtmchecks documentation built on Sept. 11, 2024, 9:34 p.m.