sensi_plot.sensiTree_Intra: Graphical diagnostics for class 'sensiIntra_Tree'

In sensiPhy: Sensitivity Analysis for Comparative Methods

Description

plot_tree.intra_phylm Plot results from tree_intra_phylm, tree_intra_phylm and tree_intra_phyglm

Usage

## S3 method for class 'sensiTree_Intra'
sensi_plot(x, graphs = "all", uncer.type = "all", ...)

Arguments

x	output from tree_intra_phylm, tree_intra_phyglm
graphs	choose which graph should be printed in the output ("all", 1, 2 or 3)
uncer.type	choose which uncertainty type should be printed ("all", "intra", "tree")
...	further arguments to methods

Details

For 'x' from tree_intra_phylm or tree_intra_phyglm:

Graphs 1 and 2: Distribution of estimated estimates and intercepts for each tree (for tree_phylm) or value generated within a given interval (interaction_intra_tree_phylm) Red vertical line represents the mean estimate or intercept for all models.

Graph 3: Scatterplot with mean regression (black line) and standard deviation of the regression (blue dotted lines).

Author(s)

Caterina Penone and Gustavo Paterno

See Also

ggplot, tree_phylm intra_phylm

sensiPhy documentation built on April 14, 2020, 7:15 p.m.