PLIsuperquantile: Perturbed-Law based sensitivity Indices (PLI) for...

In sensitivity: Global Sensitivity Analysis of Model Outputs and Importance Measures

Perturbed-Law based sensitivity Indices (PLI) for superquantile

Description

PLIsuperquantile computes the Perturbed-Law based Indices (PLI) for superquantile, which are robustness indices related to a superquantile of a model output, estimated by a Monte Carlo method. See Iooss et al. (2020).

Usage

PLIsuperquantile(order,x,y,deltasvector,InputDistributions,type="MOY",
  samedelta=TRUE, percentage=TRUE,nboot=0,conf=0.95,bootsample=TRUE,bias=TRUE)

Arguments

order	the order of the superquantile to estimate.
x	the matrix of simulation points coordinates, one column per variable.
y	the vector of model outputs.
deltasvector	a vector containing the values of delta for which the indices will be computed.
InputDistributions	a list of list. Each list contains, as a list, the name of the distribution to be used and the parameters. Implemented cases so far: For a mean perturbation: Gaussian, Uniform, Triangle, Left Trucated Gaussian, Left Truncated Gumbel. Using Gumbel requires the package evd. For a variance perturbation: Gaussian, Uniform.
type	a character string in which the user will specify the type of perturbation wanted. The sense of "deltasvector" varies according to the type of perturbation: type can take the value "MOY",in which case deltasvector is a vector of perturbated means. type can take the value "VAR",in which case deltasvector is a vector of perturbated variances, therefore needs to be positive integers.
samedelta	a boolean used with the value "MOY" for type. If it is set at TRUE, the mean perturbation will be the same for all the variables. If not, the mean perturbation will be new_mean = mean+sigma*delta where mean, sigma are parameters defined in InputDistributions and delta is a value of deltasvector.
percentage	a boolean that defines the formula used for the PLI. If it is set at FALSE, the classical formula used in the bibliographical references is used. If not (set as TRUE), the PLI is given in percentage of variation of the superquantile (even if it is negative).
nboot	the number of bootstrap replicates.
conf	the confidence level for bootstrap confidence intervals.
bootsample	If TRUE, the uncertainty about the original quantile estimation is taken into account in the PLI confidence intervals (see Iooss et al., 2020). If FALSE, standard confidence intervals are computed for the PLI. It mainly changes the CI at small delta values.
bias	defines the version of PLI-superquantile: If it is set at "TRUE", it gives the mean of outputs above the perturbed quantile (alternative formula) If it is set at "FALSE", it gives the mean of perturbed outputs above the perturbed quantile (original formula)

Value

PLIsuperquantile returns a list of matrices (each column corresponds to an input, each line corresponds to a twist of amplitude delta) containing the following components:

PLI	the PLI.
PLICIinf	the bootstrap lower confidence interval values of the PLI.
PLICIsup	the bootstrap upper confidence interval values of the PLI.
superquantile	the perturbed superquantile.
superquantileCIinf	the bootstrap lower confidence interval values of the perturbed superquantile.
superquantileCIsup	the bootstrap upper confidence interval values of the perturbed superquantile.

Author(s)

Bertrand Iooss

References

B. Iooss, V. Verges and V. Larget, 2022, BEPU robustness analysis via perturbed law-based sensitivity indices, Proceedings of the Institution of Mechanical Engineers, Part O: Journal of Risk and Reliability, 236:855-865.

P. Lemaitre, E. Sergienko, A. Arnaud, N. Bousquet, F. Gamboa and B. Iooss, 2015, Density modification based reliability sensitivity analysis, Journal of Statistical Computation and Simulation, 85:1200-1223.

See Also

PLI, PLIquantile, PLIsuperquantile_multivar

Examples

# Model: 3D function 

  distribution = list()
	for (i in 1:3) distribution[[i]]=list("norm",c(0,1))
  
# Monte Carlo sampling 

  N = 10000
	X = matrix(0,ncol=3,nrow=N)
	for(i in 1:3) X[,i] = rnorm(N,0,1)
     
	Y = 2 * X[,1] + X[,2] + X[,3]/2
	alpha <- 0.95
	
	q95 = quantile(Y,alpha)
  sq95a <- mean(Y*(Y>q95)/(1-alpha)) ; sq95b <- mean(Y[Y>q95])
	
	nboot=20 # change to nboot=200 for consistency
	
# sensitivity indices with perturbation of the mean 
  
	v_delta = seq(-1,1,1/10) 
	toto = PLIsuperquantile(alpha,X,Y,deltasvector=v_delta,
	  InputDistributions=distribution,type="MOY",samedelta=TRUE,
	  percentage=FALSE,nboot=nboot,bias=TRUE)

# Plotting the PLI
  par(mar=c(4,5,1,1))
	plot(v_delta,toto$PLI[,2],ylim=c(-0.5,0.5),xlab=expression(delta),
		ylab=expression(hat(PLI[i*delta])),pch=19,cex=1.5)
	points(v_delta,toto$PLI[,1],col="darkgreen",pch=15,cex=1.5)
	points(v_delta,toto$PLI[,3],col="red",pch=17,cex=1.5)
	lines(v_delta,toto$PLICIinf[,2],col="black")
	lines(v_delta,toto$PLICIsup[,2],col="black")
	lines(v_delta,toto$PLICIinf[,1],col="darkgreen")
	lines(v_delta,toto$PLICIsup[,1],col="darkgreen")
	lines(v_delta,toto$PLICIinf[,3],col="red")
	lines(v_delta,toto$PLICIsup[,3],col="red")
	abline(h=0,lty=2)
	legend(-1,0.5,legend=c("X1","X2","X3"),
		col=c("darkgreen","black","red"),pch=c(15,19,17),cex=1.5)
  
# Plotting the perturbed superquantiles
  par(mar=c(4,5,1,1))
	plot(v_delta,toto$superquantile[,2],ylim=c(3,7),xlab=expression(delta),
		ylab=expression(hat(q[i*delta])),pch=19,cex=1.5)
	points(v_delta,toto$superquantile[,1],col="darkgreen",pch=15,cex=1.5)
	points(v_delta,toto$superquantile[,3],col="red",pch=17,cex=1.5)
	lines(v_delta,toto$superquantileCIinf[,2],col="black")
	lines(v_delta,toto$superquantileCIsup[,2],col="black")
	lines(v_delta,toto$superquantileCIinf[,1],col="darkgreen")
	lines(v_delta,toto$superquantileCIsup[,1],col="darkgreen")
	lines(v_delta,toto$superquantileCIinf[,3],col="red")
	lines(v_delta,toto$superquantileCIsup[,3],col="red")
	abline(h=q95,lty=2)
	legend(-1,7,legend=c("X1","X2","X3"),
		col=c("darkgreen","black","red"),pch=c(15,19,17),cex=1.5)
		
# Plotting the unbiased PLI in percentage with refined confidence intervals
	toto = PLIsuperquantile(alpha,X,Y,deltasvector=v_delta,
	  InputDistributions=distribution,type="MOY",samedelta=TRUE,percentage=TRUE,
	  nboot=nboot,bootsample=FALSE,bias=FALSE)
	  
  par(mar=c(4,5,1,1))
	plot(v_delta,toto$PLI[,2],ylim=c(-0.4,0.5),xlab=expression(delta),
		ylab=expression(hat(PLI[i*delta])),pch=19,cex=1.5)
	points(v_delta,toto$PLI[,1],col="darkgreen",pch=15,cex=1.5)
	points(v_delta,toto$PLI[,3],col="red",pch=17,cex=1.5)
	lines(v_delta,toto$PLICIinf[,2],col="black")
	lines(v_delta,toto$PLICIsup[,2],col="black")
	lines(v_delta,toto$PLICIinf[,1],col="darkgreen")
	lines(v_delta,toto$PLICIsup[,1],col="darkgreen") 
	lines(v_delta,toto$PLICIinf[,3],col="red")
	lines(v_delta,toto$PLICIsup[,3],col="red")
	abline(h=0,lty=2)
	legend(-1,0.5,legend=c("X1","X2","X3"),
		col=c("darkgreen","black","red"),pch=c(15,19,17),cex=1.5)

##################################################
# another visualization by using the plotCI() fct 
# (from plotrix package) for the CI plotting (from Vanessa Verges)

	library(plotrix)
	parameters = list(colors=c("darkgreen","black","red"),symbols=c(15,19,17),
	  overlay=c(FALSE,TRUE,TRUE))
  par(mar=c(4,5,1,1),xpd=TRUE)
  for (i in 1:3){
  plotCI(v_delta,toto$PLI[,i],ui=toto$PLICIsup[,i],li=toto$PLICIinf[,i],
         cex=1.5,col=parameters$colors[i],pch=parameters$symbols[i],
         add=parameters$overlay[i], xlab="", ylab="")
  }
  title(xlab=expression(delta),ylab=expression(hat(PLI[i*delta])),
      main=bquote("PLI-superquantile (N ="~.(N) ~ ","~alpha~"="~.(alpha)~
      ") of Y="~2*X[1] + X[2] + X[3]/2))
  abline(h=0,lty=2)
  legend("topleft",legend=c("X1","X2","X3"),
          col=parameters$colors,pch=parameters$symbols,cex=1.5)

sensitivity documentation built on Sept. 11, 2024, 9:09 p.m.