API for seqHMM
Hidden Markov Models for Life Sequences and Other Multivariate, Multichannel Categorical Time Series

Global functions
EM Source code
EMx Source code
HMMplot Source code
SSPlotter Source code
alphabet Man page
biofam3c Man page
build_hmm Man page Source code
build_lcm Man page Source code
build_mhmm Man page Source code
build_mm Man page Source code
build_mmm Man page Source code
check_deprecated_args Source code
colorpalette Man page
combine_models Source code
estimate_coef Man page Source code
estimate_coefs Source code
fit_hmm Man page Source code
fit_mhmm Man page Source code
fit_model Man page Source code
forward_backward Man page Source code
forwardbackward Source code
forwardbackwardx Source code
gridplot Man page Source code
hidden_paths Man page Source code
hmm_biofam Man page
hmm_mvad Man page
isColor Source code
logLik.hmm Man page Source code
logLik.mhmm Man page Source code
logLikHMM Source code
logLikMixHMM Source code
logSumExp Source code
log_EM Source code
log_EMx Source code
log_forwardbackward Source code
log_forwardbackwardx Source code
log_logLikHMM Source code
log_logLikMixHMM Source code
log_objective Source code
log_objectivex Source code
mHMMplotgrid Source code
mHMMplotint Source code
mc_to_sc Man page Source code
mc_to_sc_data Man page Source code
mhmm_biofam Man page
mhmm_mvad Man page
mssplot Man page Source code
objective Source code
objectivex Source code
plot.hmm Man page Source code
plot.mhmm Man page Source code
plot.ssp Man page Source code
plot_colors Man page Source code
posterior_probs Man page Source code
print.hmm Man page Source code
print.mhmm Man page Source code
print.summary.mhmm Man page Source code
separate_mhmm Man page Source code
seqHMM Man page
seqHMM-deprecated Man page Man page Man page
seqHMM-deprecated-package Man page Man page Man page
seqHMM-package Man page
seqdef Man page
seqstatf Man page
simulate_emission_probs Man page Source code
simulate_hmm Man page Source code
simulate_initial_probs Man page Source code
simulate_mhmm Man page Source code
simulate_transition_probs Man page Source code
spread_models Source code
ssp Man page Source code
ssplot Man page Source code
ssplotM Source code
summary.mhmm Man page Source code
trim_hmm Man page Source code
trim_model Man page Source code
varcoef Source code
vcov.mhmm Man page Source code
viterbi Source code
viterbix Source code
seqHMM documentation built on Nov. 17, 2017, 5:58 a.m.