Files in seqHMM

Mixture Hidden Markov Models for Social Sequence Data and Other Multivariate, Multichannel Categorical Time Series

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/RcppExports.R R/check_deprecated_args.R R/seqHMM-deprecated.R R/mc_to_sc_data.R R/simulate_mhmm.R R/print.mhmm.R R/simulate_hmm.R R/state_names.R R/mHMMplotgrid.R R/ssplotM.R R/mhmm_biofam.R R/summary.mhmm.R R/print.hmm.R R/cluster_names.R R/seqHMM-package.R R/plot_colors.R R/SSPlotter.R R/logLik.hmm.R R/ssplot.R R/hmm_biofam.R R/mhmm_mvad.R R/plot.mhmm.R R/is_multichannel.R R/mssplot.R R/plot.hmm.R R/forwardBackward.R R/hmm_mvad.R R/build_mhmm.R R/build_lcm.R R/import_seqdef.R R/ssp.R R/hidden_paths.R R/biofam3c.R R/logLik.mhmm.R R/combine_models.R R/simulate_pars.R R/fit_model.R R/posterior_probs.R R/estimate_coef.R R/isColor.R R/zzz.R R/build_mm.R R/build_mmm.R R/mHMMplotint.R R/print.summary.mhmm.R R/HMMplot.R R/mc_to_sc.R R/trim_hmm.R R/colorpalette.R R/spread_models.R R/vcov.mhmm.R R/gridplot.R R/separate_mhmm.R R/build_hmm.R R/plot.ssp.R

src/seqHMM.h

src/Makevars

src/uv_forwardbackward.cpp

src/log_forwardbackwardx.cpp

src/log_logLikMixHMM.cpp

src/RcppExports.cpp

src/log_logLikHMM.cpp

src/logLikHMM.cpp

src/log_EM.cpp

src/optCoef.cpp

src/varcoef.cpp

src/internalForward.cpp

src/forwardbackward.cpp

src/log_forwardbackward.cpp

src/reparma.cpp

src/sa_opt_coef.cpp

src/EM.cpp

src/logsumexp.h

src/logLikMixHMM.cpp

src/objectivex.cpp

src/reparma.h

src/log_internalForward.cpp

src/log_internalBackward.cpp

src/log_EMx.cpp

src/log_optCoef.cpp

src/viterbix.cpp

src/log_objective.cpp

src/objective.cpp

src/log_forward_backward.h

src/logSumExp.cpp

src/internalBackward.cpp

src/optcoef.h

src/EMx.cpp

src/log_objectivex.cpp

src/forwardbackwardx.cpp

src/viterbi.cpp

src/forward_backward.h

inst/CITATION

inst/doc/seqHMM_estimation.pdf

inst/doc/seqHMM_algorithms.Rnw

inst/doc/seqHMM_visualization.Rnw

inst/doc/seqHMM.pdf

inst/doc/seqHMM.Rnw

inst/doc/seqHMM_estimation.Rnw

inst/doc/seqHMM_visualization.R inst/doc/seqHMM_algorithms.pdf inst/doc/seqHMM_visualization.pdf inst/doc/seqHMM.R

build/vignette.rds

tests/testthat.R tests/testthat/test-build_mm.R tests/testthat/test-misc.R tests/testthat/test-build_lcm.R tests/testthat/test-build_mhmm.R tests/testthat/test-build_mmm.R tests/testthat/test-build_hmm.R tests/testthat/test-fit_model.R

vignettes/references_for_vignettes.bib

vignettes/seqHMM_algorithms.Rnw

vignettes/references.bib

vignettes/seqHMM_visualization.Rnw

vignettes/seqHMM.Rnw

vignettes/seqHMM_estimation.Rnw

vignettes/sc_fit.rds

vignettes/mhmm.rds

data/mhmm_biofam.rda

data/hmm_biofam.rda

data/biofam3c.rda

data/hmm_mvad.rda

data/mhmm_mvad.rda

data/colorpalette.rda

man/build_hmm.Rd man/mhmm_biofam.Rd man/ssplot.Rd man/build_mm.Rd man/state_names.Rd man/mhmm_mvad.Rd man/build_lcm.Rd man/plot.hmm.Rd man/plot.ssp.Rd man/posterior_probs.Rd man/plot_colors.Rd man/ssp.Rd man/summary.mhmm.Rd man/hidden_paths.Rd man/TraMineR_imports.Rd man/hmm_mvad.Rd man/mc_to_sc.Rd man/cluster_names-set.Rd man/plot.mhmm.Rd man/cluster_names.Rd man/gridplot.Rd man/mc_to_sc_data.Rd man/build_mmm.Rd man/logLik.mhmm.Rd man/logLik.hmm.Rd man/biofam3c.Rd man/simulate_hmm.Rd man/simulate_pars.Rd man/estimate_coef.Rd man/state_names-set.Rd man/seqHMM.Rd man/print.Rd man/seqHMM-deprecated.Rd man/forward_backward.Rd man/colorpalette.Rd man/separate_mhmm.Rd man/mssplot.Rd man/simulate_mhmm.Rd man/vcov.mhmm.Rd man/hmm_biofam.Rd man/build_mhmm.Rd man/fit_model.Rd man/trim_model.Rd

seqHMM documentation built on July 9, 2023, 6:35 p.m.