Description Usage Arguments Examples
Save the data for a simulation for later use. When simulating multiple populations it allows saving and restoring of simulation data for each population.
1 | saveSimulation(id)
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id |
Name the simulation will be saved as. |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 | examples_dir = system.file("examples", package = "sim1000G")
vcf_file = file.path(examples_dir, "region.vcf.gz")
vcf = readVCF( vcf_file, maxNumberOfVariants = 100 ,
min_maf = 0.12 ,max_maf = NA)
# For realistic data use the functions downloadGeneticMap
generateUniformGeneticMap()
startSimulation(vcf, totalNumberOfIndividuals = 200)
ped1 = newNuclearFamily(1)
saveSimulation("sim1")
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