Description Usage Arguments Value Examples
View source: R/stochastic_simulation.R
Creates a list of molecules, reactions and associated propensities to represent the in silico system.
1 2 3 4 5 6 7 8 | createStochSystem(
insilicosystem,
writefile = F,
filepath = NULL,
filename = "simulation",
verbose = T,
ev = getJuliaEvaluator()
)
|
insilicosystem |
The in silico system (object of class |
writefile |
Does the julia function write the species and reactions lists in a text file? |
filepath |
If writefile = |
filename |
If writefile = |
verbose |
If TRUE (default), print messages to signal the start and finish of the function. |
ev |
A Julia evaluator (for the XRJulia). If none provided select the current evaluator or create one if no evaluator exists. |
A Julia proxy object to retrieve the stochastic system in the Julia evaluator.
1 2 | mysystem = createInSilicoSystem(G = 5)
stochsys = createStochSystem(mysystem)
|
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