Description Usage Arguments Value Examples
View source: R/stochastic_simulation.R
Merge (i.e. sum) the abundance of the original and modified (PTM) versions of each protein in the results of a simulation.
1 |
df |
A dataframe with the abundance of the different molecules over time (from |
A dataframe in which the abundance of original and modified versions of a protein have been merged to give the abundance of the protein (without distinction of its post-translational modification state).
1 2 3 4 5 6 | mysystem = createInSilicoSystem(G = 5, PC.p = 1, PC.PTM.p = 0.9, regcomplexes = "none", ploidy = 1)
mypop = createInSilicoPopulation(1, mysystem)
sim = simulateInSilicoSystem(mysystem, mypop, 100)
head(sim$Simulation)
mergedPTM = mergePTMAbundance(sim$Simulation)
head(mergedPTM)
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