Files in snplinkage
Single Nucleotide Polymorphisms Linkage Disequilibrium Visualizations
MD5
NAMESPACE
DESCRIPTION
R/0_imports.R
R/fetch_hgdp.R
R/associations.R
R/ggplots_ld.R
R/snplinkage-package.R
R/snprelate_ld.R
R/geno_data_fetch.R
R/geno_data_convert.R
R/2_all_generics.R
R/gtable_associations.R
R/gtable_ld.R
R/5_methods_genotype_data_subset.R
R/1_allclasses.R
R/biomart_annots.R
R/4_methods.R
R/utils.R
R/snprelate_qc.R
inst/doc/snplinkage.pdf
inst/doc/snplinkage.R
inst/doc/snplinkage.Rnw
inst/extdata/hgdp.zip
inst/extdata/hgdp.txt
inst/extdata/bmart_meta.rds
inst/script/fetch_and_reduce_hgdp.R
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-geno_data.R
tests/testthat/test-snprelate_ld.R
tests/testthat/test-vignette.R
tests/testthat/test-ggplots_ld.R
vignettes/snplinkage.Rnw
vignettes/biblio.bib
man/snprelate_allele_frequencies.Rd
man/gtable_ld_associations_gdata.Rd
man/ggplot_snp_pos.Rd
man/get_biomart_metadb.Rd
man/gdata_scans_annots.Rd
man/gtable_ld_gdata.Rd
man/gdata_add_gene_annots_aim_example.Rd
man/snplinkage-package.Rd
man/parallel_apply.Rd
man/gtable_ld_associations.Rd
man/ggplot_associations.Rd
man/select_region_idxs.Rd
man/diamond_annots.Rd
man/gdata_add_gene_annots.Rd
man/snprelate_ld_select.Rd
man/save_hgdp_as_gds.Rd
man/chisq_pvalues.Rd
man/exposition.Rd
man/snprelate_ld.Rd
man/print_qc_as_tex_table.Rd
man/gtable_ld.Rd
man/gdata_add_gene_annots_hladr_example.Rd
man/pipe.Rd
man/compound.Rd
man/chisq_pvalues_gdata.Rd
man/load_gds_as_genotype_data.Rd
man/gdata_snps_annots.Rd
man/snprelate_qc.Rd
man/ggplot_ld.Rd
