API for spmodel
Spatial Statistical Modeling and Prediction

Global functions
.onLoad Source code
AICc Man page Source code
AICc.splm Source code
AUROC Man page Source code
AUROC.spgautor Man page
AUROC.spglm Man page Source code
add_cv_coverage Source code
add_dispersion_column Source code
add_randcov_grids Source code
anis_rotation_candidates Source code
anova.spautor Man page
anova.spgautor Man page
anova.spglm Man page
anova.splm Man page Source code
anova.spmodel Man page
assemble_optim_par Source code
augment Man page
augment.spautor Man page Source code
augment.spgautor Man page Source code
augment.spglm Man page Source code
augment.splm Man page Source code
augment.spmodel Man page
augment_areal_newdata Source code
build_anis_dist_matrix_list Source code
build_car_neighbor_structure Source code
build_de_ie_grid Source code
build_local_partition_lists Source code
caribou Man page
check_W_given_data_class Source code
check_estmethod_reml_ml Source code
check_family_valid Source code
check_formula_vars_in_data Source code
check_grid_legal Source code
check_interval_augment Source code
check_kcv_folds_index Source code
check_kcv_k Source code
check_likstat_use Source code
check_local_index_length Source code
check_newdata_areal Source code
check_newdata_coords Source code
check_not_areal_type Source code
check_not_point_referenced_type Source code
check_optim_method Source code
check_p_n Source code
check_rank_collinearity Source code
check_response_numeric_and_variable Source code
check_sp_not_supported Source code
check_wrong_family Source code
clamp_theta_draw Source code
coef.spautor Man page
coef.spgautor Man page
coef.spglm Man page Source code
coef.splm Man page Source code
coef.spmodel Man page
coefficients.spautor Man page
coefficients.spgautor Man page
coefficients.spglm Man page
coefficients.splm Man page
coerce_partition_factor Source code
conditional Man page Source code
conditional.spglm Man page Source code
conditional.splm Man page Source code
confint.spautor Man page
confint.spgautor Man page
confint.spglm Man page
confint.splm Man page Source code
confint.spmodel Man page
cooks.distance.spautor Man page
cooks.distance.spgautor Man page
cooks.distance.spglm Man page
cooks.distance.splm Man page Source code
cooks.distance.spmodel Man page
cov_betahat_adjust Source code
cov_estimate_cl Source code
cov_estimate_gloglik_spautor Source code
cov_estimate_gloglik_splm Source code
cov_estimate_laploglik_spgautor Source code
cov_estimate_laploglik_spglm Source code
cov_estimate_sv Source code
cov_initial_search Source code
cov_initial_search.car Source code
cov_initial_search.exponential Source code
cov_initial_search.matern Source code
cov_initial_search.none Source code
cov_initial_search_glm Source code
cov_initial_search_glm.car Source code
cov_initial_search_glm.exponential Source code
cov_initial_search_glm.matern Source code
cov_initial_search_glm.none Source code
cov_matrix Source code
cov_matrix2 Source code
cov_matrix_cross Source code
cov_vector Source code
covmatrix Man page Source code
covmatrix.spautor Man page Source code
covmatrix.spgautor Man page
covmatrix.spglm Man page
covmatrix.splm Man page Source code
dSig_dtheta_randcov Source code
dSig_dtheta_spcov Source code
dSig_dtheta_spcov.default Source code
dSig_dtheta_spcov.exponential Source code
dSig_dtheta_spcov.gaussian Source code
dSig_dtheta_spcov.none Source code
dSig_dtheta_spcov.spherical Source code
decorrelate Man page Source code
decorrelate_data Man page Source code
decorrelate_data_internal Source code
decorrelate_data_internal_part1 Source code
decorrelate_data_internal_part2 Source code
decorrelate_grid Man page Source code
decorrelate_grid_internal Source code
decorrelate_initial_search Source code
decorrelate_newdata Man page Source code
determine_ddf Source code
deviance.spautor Man page
deviance.spgautor Man page
deviance.spglm Man page
deviance.splm Man page Source code
deviance.spmodel Man page
dispersion_checks Source code
dispersion_initial Man page Source code
dispersion_initial_NA Source code
dispersion_optim2orig Source code
dispersion_orig2optim Source code
dispersion_params Man page Source code
eacf Man page Source code
emm_basis.splm Source code
esv Man page Source code
eval_grid Source code
eval_grid_glm Source code
expand_formula_dot Source code
expit Source code
fc_borders Man page
fill_cov_params Source code
fill_optim_par Source code
finalize_interval_bounds Source code
finalize_interval_none Source code
finalize_orig2optim Source code
fit_decorrelate_algorithm Source code
fitted.spautor Man page
fitted.spgautor Man page
fitted.spglm Man page Source code
fitted.splm Man page Source code
fitted.spmodel Man page
fitted.values.spautor Man page
fitted.values.spgautor Man page
fitted.values.spglm Man page
fitted.values.splm Man page
floor_estimated_ie Source code
formula.spautor Man page
formula.spgautor Man page
formula.spglm Man page
formula.splm Man page Source code
formula.spmodel Man page
get_D Source code
get_DSigInv Source code
get_DSigInv_parallel Source code
get_L Source code
get_L_list Source code
get_L_vector Source code
get_V Source code
get_W_ij Source code
get_W_ij_parallel Source code
get_anisotropy_corrected Source code
get_areal_pred Source code
get_areal_sf_info Source code
get_avg_dist Source code
get_block_quantities Source code
get_bounding_box_dist Source code
get_cholprods Source code
get_cholprods_glm Source code
get_cholprods_glm_parallel Source code
get_cholprods_parallel Source code
get_coefficients Source code
get_coefficients_glm Source code
get_conditional_covparams Source code
get_conditional_new_from_base Source code
get_conditional_new_from_base_adjust Source code
get_conditional_new_from_base_adjust_glm Source code
get_conditional_vecchia Source code
get_conditional_vecchia_glm Source code
get_cooks_distance Source code
get_cooks_distance_glm Source code
get_cov_gradients_context Source code
get_cov_gradients_context.spautor Source code
get_cov_gradients_context.splm Source code
get_cov_matrix_list Source code
get_d Source code
get_dSig_dtheta_cov Source code
get_dSig_dtheta_cov.spautor Source code
get_dSig_dtheta_cov.splm Source code
get_data_object_spautor Source code
get_data_object_spgautor Source code
get_data_object_spglm Source code
get_data_object_splm Source code
get_decorrelate_newdata Source code
get_decorrelate_order Source code
get_decorrelated_value Source code
get_delta_se Source code
get_deviance_glm Source code
get_diag_XVXt Source code
get_dispersion_factor Source code
get_eacf Source code
get_eacf_cloud Source code
get_eacf_dotlist Source code
get_eacf_dotlist_defaults Source code
get_effective_range Source code
get_effective_range.car Source code
get_effective_range.cauchy Source code
get_effective_range.cosine Source code
get_effective_range.exponential Source code
get_effective_range.gaussian Source code
get_effective_range.gravity Source code
get_effective_range.jbessel Source code
get_effective_range.magnetic Source code
get_effective_range.matern Source code
get_effective_range.none Source code
get_effective_range.pexponential Source code
get_effective_range.rquad Source code
get_effective_range.spherical Source code
get_effective_range.wave Source code
get_effective_range_compact Source code
get_effective_range_invpower Source code
get_effective_range_monotone Source code
get_eigenprods Source code
get_eigenprods_glm Source code
get_eigenprods_glm_parallel Source code
get_eigenprods_parallel Source code
get_emmeans_dffun Source code
get_esv Source code
get_esv_cloud Source code
get_esv_dotlist Source code
get_esv_dotlist_defaults Source code
get_esv_robust Source code
get_extra_partition_list Source code
get_extra_randcov_list Source code
get_extra_randcov_partition_lists Source code
get_factor_level_names Source code
get_fit_ddf Source code
get_fitted_null Source code
get_fitted_spautor Source code
get_fitted_spgautor Source code
get_fitted_spglm Source code
get_fitted_splm Source code
get_glogclikloss Source code
get_grad_g Source code
get_grad_g.spautor Source code
get_grad_g.splm Source code
get_grad_gi Source code
get_grad_gi.spautor Source code
get_grad_gi.splm Source code
get_hatvalues Source code
get_hatvalues_glm Source code
get_initial_extra Source code
get_initial_range Source code
get_initial_range.cauchy Source code
get_initial_range.circular Source code
get_initial_range.cosine Source code
get_initial_range.cubic Source code
get_initial_range.exponential Source code
get_initial_range.gaussian Source code
get_initial_range.gravity Source code
get_initial_range.jbessel Source code
get_initial_range.magnetic Source code
get_initial_range.matern Source code
get_initial_range.none Source code
get_initial_range.pentaspherical Source code
get_initial_range.pexponential Source code
get_initial_range.rquad Source code
get_initial_range.spherical Source code
get_initial_range.triangular Source code
get_initial_range.wave Source code
get_kcv Source code
get_kcv_folds Source code
get_kcv_glm Source code
get_l00 Source code
get_local_estimation_index Source code
get_local_list_conditional Source code
get_local_list_conditional_lowrank Source code
get_local_list_conditional_vecchia Source code
get_local_list_decorrelate Source code
get_local_list_estimation Source code
get_local_list_prediction Source code
get_local_list_prediction_block Source code
get_local_list_simulation Source code
get_local_list_simulation_lowrank Source code
get_local_list_simulation_vecchia Source code
get_loocv Source code
get_loocv_glm Source code
get_loocv_iid_se Source code
get_marginal_Chi2 Source code
get_medium_precompute Source code
get_minustwolaploglik Source code
get_minustwologlik Source code
get_model_stats_spautor Source code
get_model_stats_spgautor Source code
get_model_stats_spglm Source code
get_model_stats_splm Source code
get_model_stats_splm_iid Source code
get_newdata_model_matrix Source code
get_obs_cov_matrix Source code
get_optim_dotlist Source code
get_params_list Source code
get_partition_name Source code
get_partition_names Source code
get_point_ref_coords Source code
get_pred_local_setup Source code
get_pred_spautor Source code
get_pred_spgautor Source code
get_pred_spglm Source code
get_pred_splm Source code
get_prediction_object_spautor Source code
get_prediction_object_spgautor Source code
get_prediction_object_spglm Source code
get_prediction_object_splm Source code
get_prof_sigma2 Source code
get_randcov_Z Source code
get_randcov_Zs Source code
get_randcov_groups Source code
get_randcov_label Source code
get_randcov_local Source code
get_randcov_name Source code
get_randcov_names Source code
get_randcov_slope_val_newdata Source code
get_randcov_vectors Source code
get_randcov_xlev Source code
get_range_constrain_setup Source code
get_residuals_glm Source code
get_residuals_spautor Source code
get_residuals_splm Source code
get_satterthwaite_df Source code
get_satterthwaite_method Source code
get_se_fitted_mean Source code
get_spcov_params Source code
get_sprnorm_vecchia Source code
get_svloss Source code
get_training_list Source code
get_var_y Source code
get_vcov Source code
get_vcov_glm Source code
get_vcov_theta Source code
get_vcov_theta.spautor Source code
get_vcov_theta.splm Source code
get_vcov_theta_for_conditional Source code
get_w_and_H_spgautor Source code
get_w_and_H_spglm Source code
get_w_init Source code
get_wts_varw Source code
glance Man page
glance.spautor Man page
glance.spgautor Man page
glance.spglm Man page
glance.splm Man page Source code
glance.spmodel Man page
glances Man page Source code
glances.spautor Man page
glances.spautor_list Man page
glances.spgautor Man page
glances.spgautor_list Man page
glances.spglm Man page Source code
glances.spglm_list Man page
glances.splm Man page Source code
glances.splm_list Man page Source code
glogclik Source code
gloglik Source code
gloglik_anis Source code
gloglik_products Source code
gloglik_products.car Source code
gloglik_products.exponential Source code
hatvalues.spautor Man page
hatvalues.spgautor Man page
hatvalues.spglm Man page
hatvalues.splm Man page Source code
hatvalues.spmodel Man page
hwInv Source code
influence.spautor Man page
influence.spgautor Man page
influence.spglm Man page Source code
influence.splm Man page Source code
influence.spmodel Man page
invlink Source code
invlink_conditional Source code
is.wholenumber Source code
kcv Man page Source code
kcv.spautor Man page Source code
kcv.spgautor Man page Source code
kcv.spglm Man page Source code
kcv.splm Man page Source code
known_optim_output_stub Source code
labels.spautor Man page
labels.spgautor Man page
labels.spglm Man page
labels.splm Man page Source code
labels.spmodel Man page
lake Man page
lake_preds Man page
laploglik Source code
laploglik_anis Source code
laploglik_products Source code
laploglik_products.car Source code
laploglik_products.exponential Source code
logLik.spautor Man page
logLik.spgautor Man page
logLik.spglm Man page
logLik.splm Man page Source code
logLik.spmodel Man page
logit Source code
loocv Man page Source code
loocv.spautor Man page Source code
loocv.spgautor Man page Source code
loocv.spglm Man page Source code
loocv.splm Man page Source code
loocv_iid Source code
loocv_local Source code
loocv_local_glm Source code
model.frame.spautor Man page Source code
model.frame.spgautor Man page
model.frame.spglm Man page
model.frame.splm Man page Source code
model.frame.spmodel Man page
model.matrix.spautor Man page
model.matrix.spgautor Man page
model.matrix.spglm Man page
model.matrix.splm Man page Source code
model.matrix.spmodel Man page
model_matrix_group_labels Source code
moose Man page
moose_preds Man page
moss Man page
nobs.splm Source code
optim2orig_anisotropy Source code
optim2orig_de_ie Source code
optim2orig_range Source code
orig2optim_anisotropy Source code
orig2optim_de_ie Source code
orig2optim_range Source code
partition_group Source code
partition_matrix Source code
partition_vector Source code
peel_dispersion Source code
plot.eacf Man page Source code
plot.esv Man page Source code
plot.spautor Man page Source code
plot.spgautor Man page
plot.spglm Man page
plot.splm Man page Source code
plot.spmodel Man page
precompute_sv_cl Source code
precompute_sv_wls Source code
predict.decorrelate Man page Source code
predict.decorrelate_list Man page Source code
predict.spautor Man page Source code
predict.spautorRF Man page Source code
predict.spautorRF_list Man page Source code
predict.spautor_list Man page
predict.spgautor Man page Source code
predict.spgautor_list Man page
predict.spglm Man page Source code
predict.spglm_list Man page Source code
predict.splm Man page Source code
predict.splmRF Man page Source code
predict.splmRF_list Man page Source code
predict.splm_list Man page Source code
predict.spmodel Man page
predict_block_splm Source code
predict_decorrelate_algorithm Source code
predict_terms Source code
print.anova.spautor Man page
print.anova.spgautor Man page
print.anova.spglm Man page
print.anova.splm Man page Source code
print.decorrelate Man page Source code
print.spautor Man page Source code
print.spautorRF Man page Source code
print.spgautor Man page Source code
print.spglm Man page Source code
print.splm Man page Source code
print.splmRF Man page Source code
print.spmodel Man page
print.summary.spautor Man page Source code
print.summary.spautorRF Man page Source code
print.summary.spgautor Man page Source code
print.summary.spglm Man page Source code
print.summary.splm Man page Source code
print.summary.splmRF Man page Source code
print_dispersion_block Source code
print_residual_summary Source code
pseudoR2 Man page Source code
pseudoR2.spautor Man page
pseudoR2.spgautor Man page
pseudoR2.spglm Man page
pseudoR2.splm Man page Source code
randcov_initial Man page Source code
randcov_initial_NA Source code
randcov_matrix Source code
randcov_newvar Source code
randcov_optim2orig Source code
randcov_orig2optim Source code
randcov_params Man page Source code
randcov_vector Source code
recorrelate_newdata Man page Source code
recover_data.splm Source code
reexports Man page
release_questions Source code
replace_data_object_dimcoords1 Source code
replace_newdata Source code
rescale_profiled_variance Source code
resid.spautor Man page
resid.spgautor Man page
resid.spglm Man page
resid.splm Man page
residuals.spautor Man page
residuals.spgautor Man page
residuals.spglm Man page Source code
residuals.splm Man page Source code
residuals.spmodel Man page
resolve_anis_rotation Source code
resolve_rotation_ambiguity Source code
response_checks_glm Source code
rstandard.spautor Man page
rstandard.spgautor Man page
rstandard.spglm Man page Source code
rstandard.splm Man page Source code
run_cl_dispatch Source code
run_gloglik_dispatch_spautor Source code
run_gloglik_dispatch_splm Source code
run_gloglik_optim_spautor Source code
run_gloglik_optim_splm Source code
run_laploglik_dispatch_spgautor Source code
run_laploglik_dispatch_spglm Source code
run_pred_dispatch Source code
run_sv_dispatch Source code
satterthwaite Man page Source code
satterthwaite.spautor Man page
satterthwaite.splm Man page Source code
satterthwaite_anova Source code
satterthwaite_anova.splm Source code
satterthwaite_core Source code
seal Man page
select_best_grid_point Source code
select_print_spcoef_areal Source code
select_print_spcoef_pointref Source code
sf_to_df Source code
simulate_theta_draw Source code
smwInv_rand Source code
smw_HInv Source code
smw_mHldet Source code
spautor Man page Source code
spautorRF Man page Source code
spautor_checks Source code
spautor_cov_matrixInv Source code
spcov_initial Man page Source code
spcov_initial_NA Source code
spcov_initial_NA_glm Source code
spcov_matrix Source code
spcov_matrix.car Source code
spcov_matrix.cauchy Source code
spcov_matrix.circular Source code
spcov_matrix.cosine Source code
spcov_matrix.cubic Source code
spcov_matrix.exponential Source code
spcov_matrix.gaussian Source code
spcov_matrix.gravity Source code
spcov_matrix.jbessel Source code
spcov_matrix.magnetic Source code
spcov_matrix.matern Source code
spcov_matrix.none Source code
spcov_matrix.pentaspherical Source code
spcov_matrix.pexponential Source code
spcov_matrix.rquad Source code
spcov_matrix.sar Source code
spcov_matrix.spherical Source code
spcov_matrix.triangular Source code
spcov_matrix.wave Source code
spcov_matrixInv_de Source code
spcov_matrixInv_de.car Source code
spcov_matrixInv_de.sar Source code
spcov_optim2orig Source code
spcov_optim2orig.car Source code
spcov_optim2orig.cauchy Source code
spcov_optim2orig.exponential Source code
spcov_optim2orig.matern Source code
spcov_optim2orig.pexponential Source code
spcov_orig2optim Source code
spcov_orig2optim.car Source code
spcov_orig2optim.cauchy Source code
spcov_orig2optim.exponential Source code
spcov_orig2optim.matern Source code
spcov_orig2optim.pexponential Source code
spcov_params Man page Source code
spcov_vector Source code
spcov_vector.cauchy Source code
spcov_vector.circular Source code
spcov_vector.cosine Source code
spcov_vector.cubic Source code
spcov_vector.exponential Source code
spcov_vector.gaussian Source code
spcov_vector.gravity Source code
spcov_vector.jbessel Source code
spcov_vector.magnetic Source code
spcov_vector.matern Source code
spcov_vector.none Source code
spcov_vector.pentaspherical Source code
spcov_vector.pexponential Source code
spcov_vector.rquad Source code
spcov_vector.spherical Source code
spcov_vector.triangular Source code
spcov_vector.wave Source code
spdist Source code
spdist_vectors Source code
spdist_vectors2 Source code
spgautor Man page Source code
spgautor_checks Source code
spglm Man page Source code
spglm_checks Source code
splm Man page Source code
splmRF Man page Source code
splm_checks Source code
spmodel Man page
spmodel-package Man page
sprbeta Man page Source code
sprbinom Man page Source code
sprgamma Man page Source code
sprinvgauss Man page Source code
sprnbinom Man page Source code
sprnorm Man page Source code
sprnorm.car Man page Source code
sprnorm.exponential Man page Source code
sprnorm.ie Man page
sprnorm.none Man page Source code
sprpois Man page Source code
sulfate Man page
sulfate_preds Man page
summary.spautor Man page
summary.spautorRF Man page Source code
summary.spgautor Man page
summary.spglm Man page Source code
summary.splm Man page Source code
summary.splmRF Man page Source code
summary.spmodel Man page
svloss Source code
texas Man page
tidy Man page
tidy.anova.spautor Man page
tidy.anova.spgautor Man page
tidy.anova.spglm Man page
tidy.anova.splm Man page Source code
tidy.decorrelate_grid Man page Source code
tidy.spautor Man page Source code
tidy.spgautor Man page Source code
tidy.spglm Man page Source code
tidy.splm Man page Source code
tidy.spmodel Man page
transform_anis Source code
transform_anis2 Source code
transform_anis_inv Source code
trim_optim_output Source code
try_build_theta Source code
unpack_optim2orig Source code
use_cressie_dr_nopairs_weights Source code
use_cressie_dr_weights Source code
use_cressie_nopairs_weights Source code
use_cressie_weights Source code
use_glogclik Source code
use_glogclik_known Source code
use_gloglik Source code
use_gloglik_anis Source code
use_gloglik_iid Source code
use_gloglik_known Source code
use_gloglik_known_anis Source code
use_laploglik Source code
use_laploglik_anis Source code
use_laploglik_known Source code
use_laploglik_known_anis Source code
use_pairs_invd_weights Source code
use_pairs_invsd_weights Source code
use_pairs_weights Source code
use_svloss Source code
use_svloss_known Source code
validate_randcov_initial Source code
validate_satterthwaite_scope Source code
varcomp Man page Source code
varcomp.spautor Man page Source code
varcomp.spgautor Man page
varcomp.spglm Man page
varcomp.splm Man page Source code
vcov.spautor Man page
vcov.spgautor Man page
vcov.spglm Man page Source code
vcov.splm Man page Source code
vcov.spmodel Man page
w_offset_free Source code
warn_fitted_saturation Source code
warn_optim_convergence Source code
warn_spcov_boundary Source code
warn_ycoord_ignored_for_1d_cov Source code
spmodel documentation built on Sept. 11, 2026, 1:07 a.m.