int.eprior: Integration function to find nonparametric adjustments

Description Usage Arguments Value Warning Author(s) References See Also

View source: R/int.eprior.R View source: R/ComBat.R

Description

Monte Carlo integration function to find the nonparametric adjustments

Usage

1
int.eprior(sdat, g.hat, d.hat)

Arguments

sdat

Matrix of standardized gene expression data.

g.hat

Estimated additive batch effect.

d.hat

Estimated multiplicative batch effect.

Value

Matrix with two columns containing the estimated additive and multiplicative batch effects.

Warning

This function is not called by the user directly.

Author(s)

WE Johnson

References

W. Johnson E., L. Chen, Rabinovic, and A. Adjusting batch effects in microarray expression data using Empirical Bayes methods. Biostatistics, 8(1):118-127, January2007. ISSN 1465-4644. doi: http://dx.doi.org/10.1093/biostatistics/kxj037.

See Also

ComBat


survJamda documentation built on May 19, 2017, 9:08 a.m.

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