sybil: Efficient Constrained Based Modelling

This Systems Biology Package (Gelius-Dietrich et. al. (2012) <doi:10.1186/1752-0509-7-125>) implements algorithms for constraint based analyses of metabolic networks, e.g. flux-balance analysis (FBA), minimization of metabolic adjustment (MOMA), regulatory on/off minimization (ROOM), robustness analysis and flux variability analysis. The package is easily extendable for additional algorithms. Most of the current LP/MILP solvers are supported via additional packages.

Package details

AuthorMayo Roettger [cre], Gabriel Gelius-Dietrich [aut], C. Jonathan Fritzemeier [ctb], Rajen Piernikarczyk [ctb], Marc Andre Daxer [ctb], Benjamin Braasch [ctb], Abdelmoneim Desouki [ctb], Martin J. Lercher [ctb]
MaintainerMayo Roettger <[email protected]>
LicenseGPL-3 | file LICENSE
Version2.1.5
URL http://www.cs.hhu.de/lehrstuehle-und-arbeitsgruppen/computational-cell-biology/software/sybil.html
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("sybil")

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sybil documentation built on March 7, 2019, 5:04 p.m.