checkReactId: Check if a Reaction Id is Valid
In sybil: Efficient Constrained Based Modelling

Description Usage Arguments Details Value Author(s) See Also Examples

The function checkReactId evaluates a vector of reaction id's if they are unique and appear in a given model.

1	checkReactId(model, react)

`model`	A model. An object of class `modelorg`, or a problem object of a lp solver.
`react`	Character vector containing reaction id's, or a numerical vector containing indices of reaction id's.

If argument react is numeric, the maximun value will be inspected, if it is larger than the number of reactions in the model.

In case of a character vector, react is matched to the reaction id's residing in the model. If they are not found, grep is used.

If argument react is of class reactId, it will be returned without checking.

An object of class reactId or NULL if argument react contains any reactions not in model.

Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>

Maintainer: Mayo Roettger <mayo.roettger@hhu.de>

reactId

  data(Ec_core)
 
  ## Example with react as character vector
  ids <- c("ATPM", "ACK")
  idc <- checkReactId(Ec_core, ids)

  ## Example with react as numerical vector
  ids <- c(1:4)
  idc <- checkReactId(Ec_core, ids)