deadEndMetabolites-methods: Identify Dead End Metabolites
In sybil: Efficient Constrained Based Modelling
Description
Usage
Arguments
Value
Methods
Author(s)
See Also
Description
Search a metabolic network for metabolites, which are produced, but not
consumed and vice versa.
Usage
1
2
## S4 method for signature 'modelorg'
deadEndMetabolites(object,retIds)
Arguments
object
An object of class modelorg.
retIds
Boolean. If set to TRUE, a list containing metabolite id's will be
returned, otherwise a list of logical vectors.
Default: TRUE.
Value
A list will be returned:
dem
dead end metabolites
der
reactions containing dead end metabolites
Methods
signature(object = "modelorg")-
method to use with class modelorg.
Author(s)
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Mayo Roettger <mayo.roettger@hhu.de>
See Also
Class modelorg and readTSVmod.
sybil documentation built on May 31, 2021, 5:08 p.m.
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Description Usage Arguments Value Methods Author(s) See Also
Description
Search a metabolic network for metabolites, which are produced, but not consumed and vice versa.
Usage
1 2 | ## S4 method for signature 'modelorg'
deadEndMetabolites(object,retIds)
|
Arguments
object |
An object of class |
retIds |
Boolean. If set to |
Value
A list will be returned:
dem |
dead end metabolites |
der |
reactions containing dead end metabolites |
Methods
signature(object = "modelorg")-
method to use with class
modelorg.
Author(s)
Gabriel Gelius-Dietrich <geliudie@uni-duesseldorf.de>
Maintainer: Mayo Roettger <mayo.roettger@hhu.de>
See Also
Class modelorg and readTSVmod.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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