evaluate | R Documentation |
Function for evaluating F1 by cell type, adapted from automated cell type identifiaction benchmarking paper (Abdelaal et al. Genome Biology, 2019)
evaluate(true, predicted)
true |
vector of true labels |
predicted |
vector of predicted labels |
A list of results with confusion matrix ($Conf), median F1-score ($MedF1), F1 scores per class ($F1), and accuracy ($Acc).
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