inst/tinytest/test_surv_h_constructor.R

library("tinytest")
library("data.table")
library("survival")
library("mets")
set.seed(24)
fit_survival_models <- targeted:::fit_survival_models

sim_surv_unif <- function(n) {
  id <- 1:n
  W <- runif(n, min = -1, max = 1)
  A <- rbinom(n = n, size = 1, prob = 0.5)

  TT <- runif(n, min = 0, max = 2)
  C <- runif(n, min = 0, max = 2)

  time <- apply(cbind(TT, C), 1, min)
  event <- TT < C

  d <- data.frame(id, W, A, TT, C, time, event)[order(time), ]
  return(d)
}

test_data_unif <- sim_surv_unif(n = 1e3)
u <- c(0.5, 1, 1.5)
tau0 <- 1.75

# test H_constructor_risk
empir_H_risk <- function(u) {
    (test_data_unif$TT <= tau0)[test_data_unif$TT > u] |> mean()
}
empir_H_risk <- Vectorize(empir_H_risk)

true_H_risk <- function(u) {
  res <- (1 - u / 2) - (1 - tau0 / 2)
  res <- res / (1 - u / 2)
  res <- res * (u <= tau0)
  return(res)
}
true_H_risk <- Vectorize(true_H_risk)

test_survival_models <- fit_survival_models(
  data = test_data_unif,
  response = Surv(time, event) ~ 1,
  censoring = Surv(time, event == 0) ~ 1,
  response_call = "survfit",
  censoring_call = "survfit"
)

H <- targeted:::H_constructor_risk(
  T_model = test_survival_models$T_model,
  tau = tau0,
  individual_time = FALSE
)
h <- H(u = u, data = test_data_unif)
h <- apply(h, 2, mean) |> unname()
expect_equal(h, true_H_risk(u), tolerance = 4e-2)

## # test H_constructor_surv
## test_survival_models <- fit_survival_models(
##   data = test_data_unif,
##   response = Surv(time, event) ~ 1,
##   censoring = Surv(time, event == 0) ~ 1,
##   response_call = "survfit",
##   censoring_call = "survfit"
## )

## true_H_surv <- function(u) {
##   res <- (1 - tau0 / 2)
##   res <- res / (1 - u / 2)
##   res <- res * (u <= tau0) + (u > tau0)
##   return(res)
## }
## true_H_surv <- Vectorize(true_H_surv)

## H <- targeted:::H_constructor_surv(
##   T_model = test_survival_models$T_model,
##   tau = tau0,
##   individual_time = FALSE
## )
## h <- H(u = u, data = test_data_unif)
## h <- apply(h, 2, mean) |> unname()
## expect_equal(h, true_H_surv(u), tolerance = 4e-2)

## H <- targeted:::H_constructor_surv(
##   T_model = test_survival_models$T_model,
##   tau = tau0,
##   individual_time = TRUE
## )
## h <- H(u = u, data = test_data_unif[seq_along(u), ])
## expect_equal(h, true_H_surv(u), tolerance = 4e-2)

## # test H_constructor_rmst

## test_survival_models <- fit_survival_models(
##   data = test_data_unif,
##   response = Surv(time, event) ~ 1,
##   censoring = Surv(time, event == 0) ~ 1,
##   response_call = "survfit",
##   censoring_call = "survfit"
## )

## true_H_rmst <- function(u) {
##   res <- u + (1 - u / 2)^(-1) * (tau0 - u - 1 / 4 * tau0^2 + 1 / 4 * u^2)
##   return(res)
## }
## true_H_rmst <- Vectorize(true_H_rmst)

## H <- targeted:::H_constructor_rmst(
##   T_model = test_survival_models$T_model,
##   tau = tau0,
##   individual_time = FALSE,
##   time = test_data_unif$time,
##   event = test_data_unif$event
## )
## h <- H(u = u, data = test_data_unif)
## h <- apply(h, 2, mean) |> unname()
## expect_equal(h, true_H_rmst(u), tolerance = 2e-2)

## h <- H(u = u[1], data = test_data_unif) |> mean()
## expect_equal(h, true_H_rmst(u[1]), tolerance = 2e-2)


## H <- targeted:::H_constructor_rmst(
##   T_model = test_survival_models$T_model,
##   tau = tau0,
##   individual_time = TRUE,
##   time = test_data_unif$time,
##   event = test_data_unif$event
## )
## h <- H(u = u, data = test_data_unif[seq_along(u), ])
## expect_equal(h, true_H_rmst(u), tolerance = 2e-2)

## H <- targeted:::H_constructor_rmst(
##   T_model = test_survival_models$T_model,
##   tau = tau0,
##   individual_time = FALSE,
##   time = test_data_unif$time,
##   event = test_data_unif$event,
##   sample = 100
## )
## h <- H(u = u, data = test_data_unif)
## h <- apply(h, 2, mean) |> unname()

## expect_equal(h, true_H_rmst(u), tolerance = 2e-2)

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targeted documentation built on July 15, 2026, 9:06 a.m.