cloneset.stats: MiTCR data frame basic statistics.

Description Usage Arguments Value Examples

View source: R/stats.R

Description

Compute basic statistics of TCR repertoires: number of clones, number of clonotypes, number of in-frame and out-of-frame sequences, summary of "Read.count", "Umi.count" and other.

Usage

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Arguments

.data

tcR data frames or a list with tcR data frames.

.head

How many top clones use to comput summary.

Value

if .data is a data frame, than numeric vector with statistics. If .data is a list with data frames, than matrix with statistics for each data frame.

Examples

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## Not run: 
# Compute basic statistics of list with data frames.
cloneset.stats(immdata)
repseq.stats(immdata)

## End(Not run)

tcR documentation built on May 19, 2017, 9:48 p.m.

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