gibbs.sampler: Gibbs Sampler.

Description

Perform the Gibbs Sampler method for finding frequent motifs in the given vector of strings or data.frame. Each string splitted to kmers with the given length of motif.

Usage

1
gibbs.sampler(.data, .k = 5, .niter = 500)

Arguments

.data

Vector of characters or data.frame of characters (1st col) and their numbers (2nd col) if .meat == T.

.k

Motif's length.

.niter

Number of iterations.

Value

Vector of possible motifs.


Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.