Gibbs Sampler.

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Description

Perform the Gibbs Sampler method for finding frequent motifs in the given vector of strings or data.frame. Each string splitted to kmers with the given length of motif.

Usage

1
gibbs.sampler(.data, .k = 5, .niter = 500)

Arguments

.data

Vector of characters or data.frame of characters (1st col) and their numbers (2nd col) if .meat == T.

.k

Motif's length.

.niter

Number of iterations.

Value

Vector of possible motifs.

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