kmer.profile: Profile of sequences of equal length.
In tcR: Advanced Data Analysis of Immune Receptor Repertoires

Description Usage Arguments Value See Also

Return profile for the given character vector or a data frame with sequences of equal length or list with them.

1	kmer.profile(.data, .names = rep('Noname', times=length(.data)), .verbose = F)

`.data`	Either list with elements of one of the allowed classes or object with one of the class: data.frame with first column with character sequences and second column with number of sequences or character vector.
`.names`	Names for each sequence / row in the `.data`.
`.verbose`	if T then print processing output.

Return data frame with first column "Symbol" with all possible symbols in the given sequences and other columns with names "1", "2", ... for each position with percentage for each symbol.

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tcR documentation built on July 2, 2020, 3:18 a.m.