tcgsaseq: Time-Course Gene Set Analysis for RNA-Seq Data
Version 1.6.3

Analyze RNA-seq data with variance component score test accounting for data heteroscedasticity through precision weights. Perform both gene-wise and gene set analyses, and can deal with longitudinal data. Method is detailed in: Agniel D & Hejblum BP (2017) Variance component score test for time-course gene set analysis of longitudinal RNA-seq data, Biostatistics, 18(4):589-604.

Getting started

Package details

AuthorDenis Agniel [aut], Boris P. Hejblum [aut, cre]
Date of publication2017-11-09 16:11:22 UTC
MaintainerBoris P. Hejblum <[email protected]>
LicenseGPL-2 | file LICENSE
Version1.6.3
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("tcgsaseq")

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tcgsaseq documentation built on Nov. 17, 2017, 4:37 a.m.