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tcgsaseq: Time-Course Gene Set Analysis for RNA-Seq Data
Analyze RNA-seq data with variance component score test accounting for data heteroscedasticity through precision weights. Perform both gene-wise and gene set analyses, and can deal with longitudinal data. Method is detailed in: Agniel & Hejblum (2017) <doi: 10.1093/biostatistics/kxx005>, Variance component score test for time-course gene set analysis of longitudinal RNA-seq data, Biostatistics, 18(4):589-604.
Getting started
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Package details |
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| Author | Denis Agniel [aut], Boris P. Hejblum [aut, cre], Marine Gauthier [aut] |
| Maintainer | Boris P. Hejblum <boris.hejblum@u-bordeaux.fr> |
| License | GPL-2 | file LICENSE |
| Version | 2.0.5 |
| Package repository | View on CRAN |
| Installation |
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