tcgsaseq: Time-Course Gene Set Analysis for RNA-Seq Data
Version 1.6.2

Analyze RNA-seq data with variance component score test accounting for data heteroscedasticity through precision weights. Perform both gene-wise and gene set analyses, and can deal with longitudinal data. Method is detailed in: Agniel D, Hejblum BP (2017) Variance component score test for time-course gene set analysis of longitudinal RNA-seq data, Biostatistics .

Getting started

Package details

AuthorDenis Agniel [aut], Boris P. Hejblum [aut, cre]
Date of publication2017-08-04 11:55:08 UTC
MaintainerBoris P. Hejblum <[email protected]>
LicenseGPL-2 | file LICENSE
Version1.6.2
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("tcgsaseq")

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tcgsaseq documentation built on Aug. 4, 2017, 5:10 p.m.