userfriendlyscience: Quantitative Analysis Made Accessible
Version 0.6-1

Contains a number of functions that serve two goals. First, to make R more accessible to people migrating from SPSS by adding a number of functions that behave roughly like their SPSS equivalents. Second, to make a number of slightly more advanced functions more user friendly to relatively novice users. The package also conveniently houses a number of additional functions that are intended to increase the quality of methodology and statistics in psychology, not by offering technical solutions, but by shifting perspectives, for example towards reasoning based on sampling distributions as opposed to on point estimates.

AuthorGjalt-Jorn Peters
Date of publication2017-05-09 21:16:58 UTC
MaintainerGjalt-Jorn Peters <gjalt-jorn@userfriendlyscience.com>
LicenseGPL (>= 2)
Version0.6-1
URL http://userfriendlyscience.com
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("userfriendlyscience")

Getting started

Package overview
README.md

Popular man pages

confIntOmegaSq: Confidence intervals for Omega Squared
convert: conversion functions
ggPie: A ggplot pie chart
ggqq: Easy ggplot Q-Q plot
nnc: Numbers Needed for Change
posthocTGH: posthocTGH
scaleStructure: scaleStructure
See all...

All man pages Function index File listing

Man pages

areColors: Check whether elements of a vector are valid colors
associationMatrix: associationMatrix
associationMatrixHelperFunctions: associationMatrix Helper Functions
associationsDiamondPlot: A diamondplot with confidence intervals for associations
asymmetricalScatterMatrix: asymmetricalScatterMatrix
averageFishersZs: averageFishersZs
averagePearsonRs: averagePearsonRs
basicSPSStranslationFunctions: Basic SPSS translation functions
biAxisDiamondPlot: Diamondplot with two Y axes
CIBER: Confidence Interval-Based Estimation of Relevance (CIBER)
cohensdDist: The distribution of Cohen's _d_
confIntOmegaSq: Confidence intervals for Omega Squared
confIntR: A function to compute a correlation's confidence interval
confIntV: crossTab, confIntV and cramersV
convert: conversion functions
convert.d.to.nnc: Helper functions for Numbers Needed for Change
createSigma: createSigma: convenience function for mvrnorm
curfnfinder: Function to find the name of the calling function
descr: descr (or descriptives)
detectRareWords: Looking up word frequencies
determinantStructure: Determinant Structure specification
determinantStructurePreprocessing: Functions to preprocess determinant structures
diamondPlot: Basic diamond plot construction function
didacticPlot: didacticPlot
dlvPlot: dlvPlot
escapeRegex: Escapes any characters that would have special meaning in a...
examine: Examine one or more variables
exceptionalScore: exceptionalScore
exceptionalScores: exceptionalScores
extractVarName: Extract variable names
faConfInt: Extract confidence bounds from psych's factor analysis object
factorLoadingDiamondCIplot: Two-dimensional visualisation of factor analyses
formatCI: Pretty formatting of confidence intervals
freq: Frequency tables
fullFact: fullFact
ggBarChart: Bar chart using ggplot
ggBoxplot: Box plot using ggplot
ggConfidenceCurve: Confidence Curves
ggDiamondLayer: Basic ggplot2 diamond plot layer construction functions
ggNNC: Visualising Numbers Needed for Change
ggPie: A ggplot pie chart
ggqq: Easy ggplot Q-Q plot
importLimeSurveyData: importLimeSurveyData
invertItems: invertItems
iqrOutlier: Identify outliers according to the IQR criterion
is.nr: is.nr
isTrue: isTrue
itemInspection: itemInspection
meanDiff: meanDiff
meanDiff.multi: meanDiff.multi
meansComparisonDiamondPlot: meansComparisonDiamondPlot and duoComparisonDiamondPlot
meansDiamondPlot: Diamond plots
meanSDtoDiamondPlot: A diamond plot based on means, standard deviations, and...
nnc: Numbers Needed for Change
normalityAssessment: normalityAssessment and samplingDistribution
oddsratio: oddsratio
omegaSqDist: The distribution of Omega Squared
oneway: oneway
paginatedAsymmetricalScatterMatrix: paginatedAsymmetricalScatterMatrix
panderMethods: userfriendlyscience methods to pander objects
posthocTGH: posthocTGH
powerHist: powerHist
prevalencePower: Power analysis for establishing a prevalence
printMethods: userfriendlyscience print methods
processLimeSurveyDropouts: processLimeSurveyDropouts
processLSvarLabels: A function to conveniently process LimeSurvey labels
processOpenSesameIAT: processOpenSesameIAT
pwr.confIntR: Determine required sample size for a given confidence...
pwr.omegasq: Power calculations for Omega Squared.
randomizationSuccess: Computations for successful randomization
regr: regr: a simple regression analysis wrapper
regrInfluential: Detecting influential cases in regression analyses
removeExceptionalValues: removeExceptionalValues
rMatrix: rMatrix
rnwString: rnwString functions
RsqDist: The distribution of R squared (as obtained in a regression...
scaleDiagnosis: scaleDiagnosis
scaleDiagnosisToPDF: scaleDiagnosisToPDF
scaleInspection: scaleInspection and a number of useful helper functions
scaleStructure: scaleStructure
scatterMatrix: scatterMatrix
scatterPlot: Easy ggplot2 scatter plots
setCaptionNumbering: Convenience function for numbered captions in knitr (and so,...
setFigCapNumbering: Automatic caption numbering knitr hooks for figures and...
showPearsonPower: Visualisation of the power of a Pearson correlation test
simDataSet: simDataSet
sort.associationMatrix: sort.associationMatrix
testRetestAlpha: testRetestAlpha
testRetestCES: testRetestCES
testRetestReliability: testRetestReliability
testRetestSimData: testRetestSimData is a simulated dataframe used to...
therapyMonitor: therapyMonitor & therapyMonitor.multi
userfriendlyscienceBasics: userfriendlyscience basics
userfriendlyscience-package: Userfriendlyscience

Functions

CIBER Man page Source code
Frequency Man page
\%IN\% Man page
addToLog Man page Source code
areColors Man page Source code
associationMatrix Man page Source code
associationMatrixESDefaults Man page
associationMatrixStatDefaults Man page
associationsDiamondPlot Man page Source code
associationsToDiamondPlotDf Man page Source code
asymmetricalScatterMatrix Man page Source code
averageFishersZs Man page Source code
averagePearsonRs Man page Source code
basicSPSStranslationFunctions Man page
biAxisDiamondPlot Man page Source code
cat0 Man page Source code
cohensdCI Man page Source code
computeEffectSize_d Man page Source code
computeEffectSize_etasq Man page Source code
computeEffectSize_omegasq Man page Source code
computeEffectSize_r Man page Source code
computeEffectSize_v Man page Source code
computeStatistic_chisq Man page Source code
computeStatistic_f Man page Source code
computeStatistic_r Man page Source code
computeStatistic_t Man page Source code
confIntOmegaSq Man page Source code
confIntR Man page Source code
confIntV Man page Source code
convert Man page
convert.b.to.t Man page Source code
convert.chisq.to.V Man page Source code
convert.chisq.to.p Man page Source code
convert.cohensf.to.omegasq Man page Source code
convert.cohensfsq.to.omegasq Man page Source code
convert.d.to.eer Man page Source code
convert.d.to.logodds Man page Source code
convert.d.to.nnc Man page Source code
convert.d.to.r Man page Source code
convert.d.to.t Man page Source code
convert.d.to.variance Man page Source code
convert.er.to.threshold Man page Source code
convert.etasq.to.cohensf Man page Source code
convert.f.to.d Man page Source code
convert.f.to.etasq Man page Source code
convert.f.to.omegasq Man page Source code
convert.f.to.p Man page Source code
convert.fisherz.to.r Man page Source code
convert.logodds.to.d Man page Source code
convert.logodds.to.r Man page Source code
convert.means.to.d Man page Source code
convert.ncf.to.omegasq Man page Source code
convert.omegasq.to.cohensf Man page Source code
convert.omegasq.to.cohensfsq Man page Source code
convert.omegasq.to.f Man page Source code
convert.or.to.d Man page Source code
convert.or.to.r Man page Source code
convert.percentage.to.se Man page Source code
convert.r.to.d Man page Source code
convert.r.to.fisherz Man page Source code
convert.r.to.p Man page Source code
convert.r.to.t Man page Source code
convert.t.to.d Man page Source code
convert.t.to.p Man page Source code
convert.t.to.r Man page Source code
convert.threshold.to.er Man page Source code
convertToNumeric Man page Source code
cramersV Man page Source code
createSigma Man page Source code
crossTab Man page Source code
curfnfinder Man page Source code
dCohensd Man page
dRsq Man page Source code
dataShape Man page Source code
dd Man page
descr Man page
descriptives Man page
detStructAddVarLabels Man page Source code
detStructAddVarNames Man page Source code
detStructCIBER Man page Source code
detStructComputeProducts Man page Source code
detStructComputeScales Man page Source code
detectRareWords Man page Source code
determinantStructure Man page
determinantVar Man page
diamondCoordinates Man page Source code
diamondPlot Man page Source code
didacticPlot Man page Source code
didacticPlotTheme Man page Source code
dlvPlot Man page Source code
dlvTheme Man page Source code
domegaSq Man page Source code
duoComparisonDiamondPlot Man page Source code
erDataSeq Man page Source code
escapeBS Man page
escapeRegex Man page Source code
examine Man page Source code
examineBy Man page Source code
exceptionalScore Man page Source code
exceptionalScores Man page Source code
exportToSPSS Man page Source code
extractVarName Man page Source code
faConfInt Man page Source code
factorLoadingDiamondCIplot Man page Source code
filterBy Man page Source code
formatCI Man page Source code
formatPvalue Man page Source code
formatR Man page Source code
freq Man page
frequencies Man page Source code
fullFact Man page Source code
getDat Man page Source code
getData Man page Source code
ggBarChart Man page Source code
ggBoxplot Man page Source code
ggConfidenceCurve Man page Source code
ggDiamondLayer Man page Source code
ggNNC Man page Source code
ggPie Man page Source code
ggqq Man page Source code
hasLaTeX Man page Source code
ifelseObj Man page Source code
importLimeSurveyData Man page Source code
invertItem Man page Source code
invertItems Man page Source code
iqrOutlier Man page Source code
is.even Man page Source code
is.nr Man page Source code
is.odd Man page Source code
isTrue Man page Source code
itemInspection Man page Source code
makeScales Man page Source code
massConvertToNumeric Man page Source code
meanConfInt Man page Source code
meanDiff Man page Source code
meanDiff.multi Man page Source code
meanSDtoDiamondPlot Man page Source code
meansComparisonDiamondPlot Man page Source code
meansDiamondPlot Man page Source code
mediaan Man page Source code
modus Man page Source code
nnc Man page Source code
noZero Man page Source code
normalityAssessment Man page Source code
oddsratio Man page Source code
oneway Man page Source code
pCohensd Man page
pRsq Man page Source code
paginatedAsymmetricalScatterMatrix Man page Source code
pander.associationMatrix Man page Source code
pander.crossTab Man page Source code
pander.dataShape Man page Source code
pander.descr Man page Source code
pander.examine Man page Source code
pander.examineBy Man page Source code
pander.freq Man page Source code
pander.frequencies Man page Source code
pander.meanDiff Man page Source code
pander.normalityAssessment Man page Source code
pander.oneway Man page Source code
pander.regr Man page Source code
parallelSubscales Man page Source code
pd Man page
pdExtreme Man page Source code
pdInterval Man page Source code
pdMild Man page Source code
plot.determinantStructure Man page Source code
pomegaSq Man page Source code
posthocTGH Man page Source code
powerHist Man page Source code
prevalencePower Man page Source code
print.CramersV Man page Source code
print.associationMatrix Man page Source code
print.asymmetricalScatterMatrix Man page Source code
print.cohensdCI Man page Source code
print.confIntOmegaSq Man page Source code
print.confIntV Man page Source code
print.crossTab Man page Source code
print.dataShape Man page Source code
print.descr Man page Source code
print.determinantStructure Man page Source code
print.didacticPlot Man page Source code
print.dlvPlot Man page Source code
print.examine Man page Source code
print.examineBy Man page Source code
print.freq Man page Source code
print.frequencies Man page Source code
print.fullFact Man page Source code
print.meanConfInt Man page Source code
print.meanDiff Man page Source code
print.meanDiff.multi Man page Source code
print.nnc Man page Source code
print.normalityAssessment Man page Source code
print.oddsratio Man page Source code
print.oneway Man page Source code
print.parallelSubscales Man page Source code
print.posthocTGH Man page Source code
print.power.htest.ufs Man page Source code
print.powerHist Man page Source code
print.processOpenSesameIAT Man page Source code
print.processOpenSesameIAT.log Man page Source code
print.rMatrix Man page Source code
print.regr Man page Source code
print.regrInfluential Man page Source code
print.scaleDiagnosis Man page Source code
print.scaleInspection Man page Source code
print.scaleStructure Man page Source code
print.scatterMatrix Man page Source code
print.sdConfInt Man page Source code
print.testRetestAlpha Man page Source code
print.testRetestCES Man page Source code
print.testRetestReliability Man page Source code
print.therapyMonitor Man page Source code
print.therapyMonitor.multi Man page Source code
prob.randomizationSuccess Man page Source code
processLSvarLabels Man page Source code
processLimeSurveyDropouts Man page Source code
processOpenSesameIAT Man page Source code
pwr.cohensdCI Man page
pwr.confIntR Man page Source code
pwr.confIntd Man page
pwr.omegasq Man page Source code
pwr.randomizationSuccess Man page Source code
qCohensd Man page
qRsq Man page Source code
qd Man page
qomegaSq Man page Source code
rCohensd Man page
rMatrix Man page Source code
rRsq Man page Source code
rawDataDiamondLayer Man page Source code
rd Man page
regr Man page Source code
regrInfluential Man page Source code
removeExceptionalValues Man page Source code
repStr Man page
repeatStr Man page
rnwString Man page
rnwString.generate Man page Source code
rnwString.initiate Man page Source code
rnwString.terminate Man page Source code
romegaSq Man page Source code
safeRequire Man page Source code
samplingDistribution Man page Source code
sanitizeLatexString Man page Source code
scaleDiagnosis Man page Source code
scaleDiagnosisToPDF Man page Source code
scaleInspection Man page Source code
scaleReliability Man page
scaleStructure Man page
scatterMatrix Man page Source code
scatterPlot Man page Source code
sdConfInt Man page Source code
setCaptionNumbering Man page Source code
setFigCapNumbering Man page Source code
setTabCapNumbering Man page Source code
showPearsonPower Man page Source code
simDataSet Man page Source code
sort.associationMatrix Man page Source code
subdeterminantProducts Man page
subdeterminants Man page
testRetestAlpha Man page Source code
testRetestCES Man page Source code
testRetestReliability Man page Source code
testRetestSimData Man page
textToWords Man page Source code
therapyMonitor Man page Source code
therapyMonitor.multi Man page Source code
trim Man page Source code
useAll Man page Source code
userfriendlyscience Man page
userfriendlyscience-package Man page
userfriendlyscienceBasics Man page
userfriendlysciencePanderMethods Man page
userfriendlysciencePrintMethods Man page
varsToDiamondPlotDf Man page Source code
vecTxt Man page Source code
vecTxtQ Man page Source code

Files

inst
inst/CITATION
NAMESPACE
NEWS
data
data/testRetestSimData.rda
R
R/regrInfluential.R
R/detStructComputeProducts.R
R/detectRareWords.R
R/exceptionalScores.R
R/convert.R
R/pwr.omegasq.R
R/convertToNumeric.R
R/meanDiff.R
R/didacticPlot.R
R/therapyMonitor.multi.R
R/convert.d.to.eer.R
R/processLSvarLabels.R
R/areColors.R
R/detStructCIBER.R
R/pwr.confIntR.R
R/dlvPlot.R
R/associationMatrix.R
R/testRetestAlpha.R
R/userfriendlyscienceBasics.R
R/setFigCapNumbering.R
R/descr.R
R/crossTab.R
R/prob.randomizationSuccess.R
R/cohensdDist.R
R/simDataSet.R
R/ggqq.R
R/pwr.cohensdCI.R
R/factorLoadingDiamondCIplot.R
R/iqrOutlier.R
R/fullFact.R
R/freq.R
R/invertItems.R
R/detStructAddVarLabels.R
R/scatterMatrix.R
R/vecTxt.R
R/testRetestReliability.R
R/curfnfinder.R
R/diamondPlot.R
R/ggPie.R
R/meansDiamondPlot.R
R/confIntOmegaSq.R
R/scatterPlot.R
R/prevalencePower.R
R/therapyMonitor.R
R/scaleStructure.R
R/associationsDiamondPlot.R
R/ggNNC.R
R/detStructComputeScales.R
R/removeExceptionalValues.R
R/powerHist.R
R/makeScales.R
R/paginatedAsymmetricalScatterMatrix.R
R/rawDataDiamondLayer.R
R/rnwString.R
R/confIntR.R
R/processLimeSurveyDropouts.R
R/RsqDist.R
R/invertItem.R
R/examineBy.R
R/basicSPSStranslationFunctions.R
R/safeRequire.R
R/meanSDtoDiamondPlot.R
R/showPearsonPower.R
R/normalityAssessment.R
R/formatCI.R
R/oddsratio.R
R/formatPvalue.R
R/faConfInt.R
R/averagePearsonRs.R
R/massConvertToNumeric.R
R/associationsToDiamondPlotDf.R
R/oneway.R
R/biAxisDiamondPlot.R
R/ggDiamondLayer.R
R/determinantStructure.R
R/convert.threshold.to.er.R
R/scaleDiagnosisToPDF.R
R/exceptionalScore.R
R/cohensdCI.R
R/scaleInspection.R
R/ggBarChart.R
R/extractVarName.R
R/itemInspection.R
R/nnc.R
R/diamondCoordinates.R
R/convert.d.to.nnc.R
R/trim.R
R/escapeRegex_(from_Hmisc).R
R/asymmetricalScatterMatrix.R
R/frequencies.R
R/CIBER.R
R/userfriendlyscience.R
R/regr.R
R/detStructAddVarNames.R
R/setCaptionNumbering.R
R/dataShape.R
R/varsToDiamondPlotDf.R
R/meansComparisonDiamondPlot.R
R/repeatStr.R
R/pwr.randomizationSuccess.R
R/duoComparisonDiamondPlot.R
R/sort.associationMatrix.R
R/samplingDistribution.R
R/posthocTGH.R
R/importLimeSurveyData.R
R/erDataSeq.R
R/scaleDiagnosis.R
R/meanConfInt.R
R/omegaSqDist.R
R/confIntV.R
R/ggConfidenceCurve.R
R/averageFishersZs.R
R/examine.R
R/setTabCapNumbering.R
R/processOpenSesameIAT.R
R/sdConfInt.R
R/rMatrix.R
R/testRetestCES.R
R/createSigma.R
R/meanDiff.multi.R
R/ggBoxplot.R
README.md
MD5
DESCRIPTION
man
man/regr.Rd
man/randomizationSuccess.Rd
man/meanDiff.Rd
man/scaleDiagnosis.Rd
man/iqrOutlier.Rd
man/didacticPlot.Rd
man/exceptionalScores.Rd
man/userfriendlyscience-package.Rd
man/biAxisDiamondPlot.Rd
man/associationMatrix.Rd
man/oneway.Rd
man/isTrue.Rd
man/testRetestReliability.Rd
man/areColors.Rd
man/setCaptionNumbering.Rd
man/dlvPlot.Rd
man/freq.Rd
man/sort.associationMatrix.Rd
man/createSigma.Rd
man/rMatrix.Rd
man/is.nr.Rd
man/omegaSqDist.Rd
man/normalityAssessment.Rd
man/asymmetricalScatterMatrix.Rd
man/panderMethods.Rd
man/diamondPlot.Rd
man/simDataSet.Rd
man/processOpenSesameIAT.Rd
man/extractVarName.Rd
man/rnwString.Rd
man/regrInfluential.Rd
man/processLSvarLabels.Rd
man/prevalencePower.Rd
man/testRetestAlpha.Rd
man/convert.Rd
man/convert.d.to.nnc.Rd
man/meanSDtoDiamondPlot.Rd
man/ggDiamondLayer.Rd
man/ggqq.Rd
man/associationsDiamondPlot.Rd
man/importLimeSurveyData.Rd
man/oddsratio.Rd
man/descr.Rd
man/averagePearsonRs.Rd
man/therapyMonitor.Rd
man/CIBER.Rd
man/averageFishersZs.Rd
man/escapeRegex.Rd
man/meansDiamondPlot.Rd
man/basicSPSStranslationFunctions.Rd
man/examine.Rd
man/ggBoxplot.Rd
man/setFigCapNumbering.Rd
man/ggBarChart.Rd
man/itemInspection.Rd
man/scaleStructure.Rd
man/printMethods.Rd
man/userfriendlyscienceBasics.Rd
man/factorLoadingDiamondCIplot.Rd
man/curfnfinder.Rd
man/ggNNC.Rd
man/removeExceptionalValues.Rd
man/confIntOmegaSq.Rd
man/showPearsonPower.Rd
man/processLimeSurveyDropouts.Rd
man/scaleDiagnosisToPDF.Rd
man/confIntV.Rd
man/invertItems.Rd
man/ggPie.Rd
man/determinantStructurePreprocessing.Rd
man/pwr.confIntR.Rd
man/exceptionalScore.Rd
man/fullFact.Rd
man/paginatedAsymmetricalScatterMatrix.Rd
man/determinantStructure.Rd
man/scatterMatrix.Rd
man/scaleInspection.Rd
man/scatterPlot.Rd
man/formatCI.Rd
man/confIntR.Rd
man/testRetestSimData.Rd
man/RsqDist.Rd
man/testRetestCES.Rd
man/cohensdDist.Rd
man/detectRareWords.Rd
man/pwr.omegasq.Rd
man/meanDiff.multi.Rd
man/meansComparisonDiamondPlot.Rd
man/powerHist.Rd
man/associationMatrixHelperFunctions.Rd
man/posthocTGH.Rd
man/faConfInt.Rd
man/ggConfidenceCurve.Rd
man/nnc.Rd
userfriendlyscience documentation built on May 19, 2017, 4:19 p.m.