Man pages for vigicaen
'VigiBase' Pharmacovigilance Database Toolbox

add_adrAdd ADR column(s) to a dataset
add_drugAdd DRUG column(s) to a dataset (tidyverse syntax)
cffFast formatting of numbers
check_dmCheck binary variables
compute_disproCompute disproportionality
compute_interactionCompute interaction disproportionality
compute_or_modCompute (r)OR from a model summary
create_example_tablesExample source tables for VigiBase and MedDRA
demo_Data of immune checkpoint inhibitors.
desc_contSummarize continuous variables
desc_dchDechallenge descriptive
desc_facvarSummarise categorical variables
desc_outcomeOutcome descriptive
desc_rchRechallenge descriptive
desc_ttoTime to onset descriptive
dt_fstRead fst and convert to data.table
dt_parquetRead parquet and convert to data.table
ex_Data for the immune checkpoint inhibitors example
extract_ttoTime to onset extraction
get_atc_codeGet ATC codes (DrecNos or MPIs)
get_drecnoGet DrecNo from drug names or MedicinalProd_Id
get_llt_smqExtract low level terms from SMQs
get_llt_socExtract low level terms from soc classification
ic_tailCredibility interval limits for the information component
meddra_Sample of Meddra.
mp_Sample of WHODrug
nice_pNice printing of p-values
screen_adrScreening of Adverse Drug Reactions
screen_drugScreening of Drugs
tb_meddraCreate MedDRA tables
tb_subsetExtract of subset of Vigibase
tb_vigibaseCreate main VigiBase ECL tables
tb_whoCreate main WHO tables
vigicaen-deprecatedDeprecated functions in package 'vigicaen'.
vigicaen-packagevigicaen: 'VigiBase' Pharmacovigilance Database Toolbox
vigi_routinePharmacovigilance routine function
vigicaen documentation built on April 3, 2025, 8:55 p.m.