fuseSurroundings: fuseSurroundings

In AlexJanse/cMut: Identify Clustered Single Nucleotide Mutations and Link Them to Mutational Patterns

Description

A function to combine surroundings by using nucleotide symbols. See dnaAlphabet for an explanation what these symbols are.

Usage

fuseSurroundings(surroundings, mutationSymbol, showWarning)

Arguments

surroundings	The list with the surrounding nucleotides found in a cluster
mutationSymbol	A string with the symbol that stands for the mutated nucleotide location in the context. (e.g. "." in "G.C")
showWarning	A Boolean if there need to be a warning if nrow is 0.

AlexJanse/cMut documentation built on May 25, 2019, 4 a.m.