qc_scatter_plot: Generate a QC Scatter Plot for a pair of metrics

In AllenInstitute/BarMixer: Hashed scRNA-seq demultiplexing for .h5 files

Description

Generate a QC Scatter Plot for a pair of metrics

Usage

qc_scatter_plot(
  meta,
  column_x = "n_reads",
  name_x = "N Reads per Cell",
  column_y = "n_umis",
  name_y = "N UMIs per Cell",
  log_x = TRUE,
  frac_x = FALSE,
  log_y = TRUE,
  frac_y = FALSE,
  show_targets = TRUE,
  color = "dodgerblue"
)

Arguments

meta	A data.frame containing metadata
column_x	A character object specifying the metadata to display on the x-axis
name_x	A character object specifying a name to display on the x-axis
column_y	A character object specifying the metadata to display on the y-axis
name_y	A character object specifying a name to display on the y-axis
log_x	A logical indicating whether or not to log10-scale the x-axis. Default is TRUE.
frac_x	A logical indicating whether or not to scale the x-axis between 0 and 1. Default is FALSE
log_y	A logical indicating whether or not to log10-scale the y-axis. Default is TRUE.
frac_y	A logical indicating whether or not to scale the y-axis between 0 and 1. Default is FALSE
show_targets	A logical indicating whether or not to plot lines displaying ratios of values. Default is TRUE.
color	A character object specifying the color to use for for the points. Default is "dodgerblue".

Value

a ggplot2 plot object

AllenInstitute/BarMixer documentation built on Dec. 17, 2021, 8:42 a.m.