API for AlmogAngel/xCell2
A Tool for Generic Cell Type Enrichment Analysis
| Global functions | |
|---|---|
| BlueprintEncode.xCell2Ref | Man page |
| CreateSignatures | Source code |
| DICE_demo.xCell2Ref | Man page |
| GetCellTypeCorrelation | Source code |
| ImmGenData.xCell2Ref | Man page |
| ImmuneCompendium.xCell2Ref | Man page |
| LM22.xCell2Ref | Man page |
| LearnParams | Source code |
| LoadDependenciesFromFile | Source code |
| MakeGEPMat | Source code |
| MakeQuantiles | Source code |
| MouseRNAseqData.xCell2Ref | Man page |
| PanCancer.xCell2Ref | Man page |
| PrepRefMix | Source code |
| ScToPseudoBulk | Source code |
| TMECompendium.xCell2Ref | Man page |
| TabulaMurisBlood.xCell2Ref | Man page |
| TabulaSapiensBlood.xCell2Ref | Man page |
| ValidateInputs | Source code |
| dependencies | Man page |
| dice_demo_ref | Man page |
| genesUsed | Man page |
| getDeps | Man page |
| getDeps,xCell2Object-method | Man page |
| getGenesUsed | Man page |
| getGenesUsed,xCell2Object-method | Man page |
| getParams | Man page |
| getParams,xCell2Object-method | Man page |
| getSignatures | Man page |
| getSignatures,xCell2Object-method | Man page |
| getSpillMat | Man page |
| getSpillMat,xCell2Object-method | Man page |
| mix_demo | Man page |
| params | Man page |
| setDeps<- | Man page |
| setDeps<-,xCell2Object-method | Man page |
| setGenesUsed<- | Man page |
| setGenesUsed<-,xCell2Object-method | Man page |
| setParams<- | Man page |
| setParams<-,xCell2Object-method | Man page |
| setSignatures<- | Man page |
| setSignatures<-,xCell2Object-method | Man page |
| setSpillMat<- | Man page |
| setSpillMat<-,xCell2Object-method | Man page |
| signatures | Man page |
| spillMat | Man page |
| xCell2Analysis | Man page Source code |
| xCell2GetLineage | Man page Source code |
| xCell2Object-class | Man page |
| xCell2Train | Man page Source code |
