LM22.xCell2Ref: LM22 Reference
In AlmogAngel/xCell2: A Tool for Generic Cell Type Enrichment Analysis
LM22.xCell2Ref R Documentation
LM22 Reference
Description
A reference object for use in 'xCell2Analysis' or to create a new reference using 'xCell2Train'.
Usage
data(LM22.xCell2Ref, package = "xCell2")
Format
An 'xCell2Object' (S4) containing:
paramsA tibble of parameters for linear transformation.
signaturesA list containing cell-type signatures.
dependenciesA list specifying cell type dependencies.
spill_matA matrix representing spillover correction factors.
genes_usedA character vector of genes used to generate the reference.
Details
xCell2 Object Trained from the LM22 Reference
An xCell2 reference object created from the LM22 reference.
Source
Generated by Newman AM (2015); trained by Angel A, et al. (2024).
AlmogAngel/xCell2 documentation built on Dec. 19, 2024, 8:21 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| LM22.xCell2Ref | R Documentation |
LM22 Reference
Description
A reference object for use in 'xCell2Analysis' or to create a new reference using 'xCell2Train'.
Usage
data(LM22.xCell2Ref, package = "xCell2")
Format
An 'xCell2Object' (S4) containing:
paramsA tibble of parameters for linear transformation.
signaturesA list containing cell-type signatures.
dependenciesA list specifying cell type dependencies.
spill_matA matrix representing spillover correction factors.
genes_usedA character vector of genes used to generate the reference.
Details
xCell2 Object Trained from the LM22 Reference
An xCell2 reference object created from the LM22 reference.
Source
Generated by Newman AM (2015); trained by Angel A, et al. (2024).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.