dice_demo_ref: Subset of the DICE Reference

In AlmogAngel/xCell2: A Tool for Generic Cell Type Enrichment Analysis

Subset of the DICE Reference

Description

Demo reference object derived from the DICE dataset for training xCell2 references.

Usage

data(dice_demo_ref, package = "xCell2")

Format

A SummarizedExperiment object.

Details

Subset of the DICE Reference

A subset of the DICE reference stored as a 'SummarizedExperiment' object for the xCell 2.0 vignette. This demo reference object demonstrates the use of xCell2Train for generating a custom xCell2 reference.

Source

Schmiedel B et al. (2018).

See Also

xCell2Train for generating references, and xCell2Analysis for enrichment analysis.

AlmogAngel/xCell2 documentation built on Jan. 3, 2025, 2:03 a.m.