DICE_demo.xCell2Ref: Demo xCell2 Reference Object
In AlmogAngel/xCell2: A Tool for Generic Cell Type Enrichment Analysis
DICE_demo.xCell2Ref R Documentation
Demo xCell2 Reference Object
Description
This object can be used to learn and demonstrate the functionality of the 'xCell2Analysis' function.
Usage
data(DICE_demo.xCell2Ref, package = "xCell2")
Format
An 'xCell2Object' (S4) containing:
paramsA tibble of parameters for linear transformation.
signaturesA list containing cell-type signatures.
dependenciesA list specifying cell type dependencies.
spill_matA matrix representing spillover correction factors.
genes_usedA character vector of genes used to generate the reference.
Details
Demo xCell2 Reference Object from a Subset of the DICE Reference
A demo xCell2 reference object derived from a subset of the DICE reference dataset.
Source
Schmiedel B et al. (2018)
AlmogAngel/xCell2 documentation built on Dec. 19, 2024, 8:21 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| DICE_demo.xCell2Ref | R Documentation |
Demo xCell2 Reference Object
Description
This object can be used to learn and demonstrate the functionality of the 'xCell2Analysis' function.
Usage
data(DICE_demo.xCell2Ref, package = "xCell2")
Format
An 'xCell2Object' (S4) containing:
paramsA tibble of parameters for linear transformation.
signaturesA list containing cell-type signatures.
dependenciesA list specifying cell type dependencies.
spill_matA matrix representing spillover correction factors.
genes_usedA character vector of genes used to generate the reference.
Details
Demo xCell2 Reference Object from a Subset of the DICE Reference
A demo xCell2 reference object derived from a subset of the DICE reference dataset.
Source
Schmiedel B et al. (2018)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.