xCell2Object-class: xCell2Object Class
In AlmogAngel/xCell2: A Tool for Generic Cell Type Enrichment Analysis
xCell2Object-class R Documentation
xCell2Object Class
Description
An S4 class to represent the xCell2 reference object. This object contains
cell type-specific gene signatures, hierarchical dependencies, linear transformation parameters,
spillover correction matrices, and genes used for training.
Slots
signaturesA list of cell type-specific gene signatures.
dependenciesA list of hierarchical dependencies between cell types.
paramsA data frame containing linear transformation parameters for cell types.
spill_matA matrix containing spillover correction factors for cell types.
genes_usedA character vector of genes used for training the xCell2 reference object.
AlmogAngel/xCell2 documentation built on Dec. 19, 2024, 8:21 a.m.
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| xCell2Object-class | R Documentation |
xCell2Object Class
Description
An S4 class to represent the xCell2 reference object. This object contains cell type-specific gene signatures, hierarchical dependencies, linear transformation parameters, spillover correction matrices, and genes used for training.
Slots
signaturesA list of cell type-specific gene signatures.
dependenciesA list of hierarchical dependencies between cell types.
paramsA data frame containing linear transformation parameters for cell types.
spill_matA matrix containing spillover correction factors for cell types.
genes_usedA character vector of genes used for training the xCell2 reference object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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