getExperimentSamplesAssayFileData: getExperimentSamplesAssayFileData - Gets file attached as...

In AmundsenJunior/pfsrsdk: Functions for interacting with Platform for Science APIs

Description

getExperimentSamplesAssayFileData Gets file attached as assay data. Use getExperimentSamplesAssayData for non-file data.

Usage

getExperimentSamplesAssayFileData(coreApi, assayType,
  experimentSampleBarcode, attributeName, useVerbose = FALSE)

Arguments

coreApi	coreApi object with valid jsessionid
assayType	assay type to get
experimentSampleBarcode	experiment sample barcode of entity to get
attributeName	Name of the attibute that containts the file data
useVerbose	TRUE or FALSE to indicate if verbose options should be used in http

Details

getExperimentSamplesAssayFileData Gets file attached as assay data.

Value

List of length 2, containing entity and response objects:

• entity is the binary-format HTTP response content.

• response is the entire HTTP response.

Author(s)

Craig Parman [e-mail]

Scott Russell [e-mail]

Examples

## Not run: 
api <- coreAPI("PATH TO JSON FILE")
login <- authBasic(api)
response <- getExperimentSamplesAssayFileData(login$coreApi, "assayType", "experimentSampleBarcode", "CI_FILE")
writeBin(response$entity, "myfile.png")
logOut(login$coreApi)

## End(Not run)

AmundsenJunior/pfsrsdk documentation built on July 18, 2019, 8:10 p.m.