keysToNames: keysToNames
In BIMIB-DISCo/TRONCO: TRONCO, an R package for TRanslational ONCOlogy
keysToNames R Documentation
keysToNames
Description
Convert colnames/rownames of a matrix into intelligible event names, e.g., change a key G23 in 'Mutation KRAS'.
If a name is not found, the original name is left unchanged.
Usage
keysToNames(x, matrix)
Arguments
x
A TRONCO compliant dataset.
matrix
A matrix with colnames/rownames which represent genotypes keys.
Value
The matrix with intelligible colnames/rownames.
Examples
data(test_model)
adj_matrix = as.adj.matrix(test_model, events=as.events(test_model)[5:15,])$capri_bic
keysToNames(test_model, adj_matrix)
BIMIB-DISCo/TRONCO documentation built on May 7, 2024, 8:13 p.m.
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| keysToNames | R Documentation |
keysToNames
Description
Convert colnames/rownames of a matrix into intelligible event names, e.g., change a key G23 in 'Mutation KRAS'. If a name is not found, the original name is left unchanged.
Usage
keysToNames(x, matrix)
Arguments
x |
A TRONCO compliant dataset. |
matrix |
A matrix with colnames/rownames which represent genotypes keys. |
Value
The matrix with intelligible colnames/rownames.
Examples
data(test_model)
adj_matrix = as.adj.matrix(test_model, events=as.events(test_model)[5:15,])$capri_bic
keysToNames(test_model, adj_matrix)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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