ScoreMatrix-class: An S4 class for storing 'ScoreMatrix' function results

Description Constructors Coercion Subsetting See Also

Description

The resulting object is an extension of a matrix object, and stores values (typically genome-wide scores) for a predefined set of regions Each row on the ScoreMatrix is a predefined region (Ex: CpG islands, promoters) and columns are values across those regions.

Constructors

see ScoreMatrix

Coercion

as(from, "matrix"): Creates a matrix from ScoreMatrix object. You can also use S3Part() function to extract the matrix from ScoreMatrix object.

Subsetting

In the code snippets below, x is a ScoreMatrix object. 'x[i,j]': Get or set elements from row i and column j and return a subset ScoreMatrix object.

See Also

ScoreMatrix


BIMSBbioinfo/genomation documentation built on Feb. 4, 2018, 12:11 p.m.